Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6131 and GFF6132 overlap by 4 nucleotides GFF6132 and GFF6133 overlap by 4 nucleotides GFF6133 and GFF6134 are separated by 1 nucleotides
GFF6131 - ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 32,714 to 33,445
GFF6131
GFF6132 - ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 33,442 to 34,245
GFF6132
GFF6133 - ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 34,242 to 35,105
GFF6133
GFF6134 - ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 35,107 to 35,988
GFF6134
Position (kb) 34
35
36 Strain fitness (log2 ratio) -1
0
1 at 33.494 kb on + strand at 33.495 kb on - strand at 33.777 kb on - strand, within GFF6132 at 34.831 kb on + strand, within GFF6133 at 34.831 kb on + strand, within GFF6133 at 34.831 kb on + strand, within GFF6133 at 34.832 kb on - strand, within GFF6133 at 34.832 kb on - strand, within GFF6133 at 34.832 kb on - strand, within GFF6133 at 34.931 kb on - strand, within GFF6133 at 34.931 kb on - strand, within GFF6133 at 34.957 kb on + strand, within GFF6133 at 35.108 kb on + strand at 35.108 kb on + strand at 35.109 kb on - strand at 35.109 kb on - strand at 35.109 kb on - strand at 35.213 kb on + strand, within GFF6134 at 35.213 kb on + strand, within GFF6134 at 35.213 kb on + strand, within GFF6134 at 35.214 kb on - strand, within GFF6134 at 35.357 kb on + strand, within GFF6134 at 35.417 kb on + strand, within GFF6134 at 35.418 kb on - strand, within GFF6134 at 35.450 kb on + strand, within GFF6134 at 35.450 kb on + strand, within GFF6134 at 35.451 kb on - strand, within GFF6134 at 35.911 kb on + strand at 35.912 kb on - strand at 35.942 kb on + strand at 35.942 kb on + strand at 35.943 kb on - strand at 35.943 kb on - strand at 35.943 kb on - strand at 36.054 kb on + strand at 36.054 kb on + strand at 36.054 kb on + strand at 36.054 kb on + strand at 36.055 kb on - strand at 36.055 kb on - strand at 36.055 kb on - strand at 36.055 kb on - strand at 36.055 kb on - strand at 36.055 kb on - strand at 36.055 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 33,494 + -0.6 33,495 - -0.0 33,777 - GFF6132 0.42 +0.4 34,831 + GFF6133 0.68 +0.2 34,831 + GFF6133 0.68 -0.9 34,831 + GFF6133 0.68 -0.6 34,832 - GFF6133 0.68 -0.1 34,832 - GFF6133 0.68 -0.5 34,832 - GFF6133 0.68 -0.9 34,931 - GFF6133 0.80 -0.7 34,931 - GFF6133 0.80 +0.7 34,957 + GFF6133 0.83 +0.1 35,108 + +0.1 35,108 + +0.4 35,109 - -0.6 35,109 - -0.2 35,109 - -0.1 35,213 + GFF6134 0.12 -0.5 35,213 + GFF6134 0.12 +0.6 35,213 + GFF6134 0.12 -0.4 35,214 - GFF6134 0.12 +1.1 35,357 + GFF6134 0.28 -0.1 35,417 + GFF6134 0.35 -0.6 35,418 - GFF6134 0.35 +0.5 35,450 + GFF6134 0.39 -0.8 35,450 + GFF6134 0.39 -0.3 35,451 - GFF6134 0.39 -0.6 35,911 + +0.0 35,912 - +0.2 35,942 + -0.2 35,942 + -0.4 35,943 - +0.5 35,943 - +0.2 35,943 - +0.8 36,054 + -0.2 36,054 + +0.4 36,054 + -0.1 36,054 + -0.5 36,055 - -0.6 36,055 - -1.3 36,055 - -0.9 36,055 - -1.1 36,055 - +1.4 36,055 - -0.4 36,055 - -0.4
Or see this region's nucleotide sequence