Strain Fitness in Variovorax sp. SCN45 around GFF6011

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
70,242	-		GFF6010	0.33	-0.3
70,242	-		GFF6010	0.33	+0.7
70,598	+		GFF6010	0.59	-0.9
70,805	+		GFF6010	0.74	-1.4
70,805	+		GFF6010	0.74	-0.9
70,914	-		GFF6010	0.82	+1.0
71,057	+				-0.4
71,057	+				-0.1
71,058	-				-0.3
71,122	+				-0.5
71,463	+		GFF6011	0.43	-0.9
71,497	-		GFF6011	0.48	-0.3
71,522	+		GFF6011	0.51	-0.2
71,523	-		GFF6011	0.51	+0.2
71,731	-		GFF6011	0.81	+0.1
71,873	-				-0.5
71,998	+				+0.7
71,998	+				+0.1
71,998	+				-0.3
71,999	-				-1.5
72,075	+				-0.5
72,178	+		GFF6012	0.20	+0.5
72,489	+		GFF6012	0.51	-0.7