Strain Fitness in Variovorax sp. SCN45 around GFF5229

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
92,051	+		GFF5228	0.60	-0.4
92,063	+		GFF5228	0.60	-0.9
92,124	-		GFF5228	0.63	+0.0
92,173	+		GFF5228	0.66	+1.2
92,208	-		GFF5228	0.68	+0.5
92,254	-		GFF5228	0.70	-0.6
92,681	+				+0.0
92,681	+				-0.7
92,681	+				+0.3
92,681	+				-0.1
92,681	+				+0.6
92,682	-				-0.8
92,934	+				-0.1
93,067	+				-1.7
93,068	-				+0.9
93,068	-				-0.8
94,027	+		GFF5229	0.69	-0.7
94,027	+		GFF5229	0.69	-0.6
94,028	-		GFF5229	0.69	-0.2
94,028	-		GFF5229	0.69	-0.4
94,133	-		GFF5229	0.76	-1.5
94,201	+		GFF5229	0.81	+0.3
94,201	+		GFF5229	0.81	-0.5
94,201	+		GFF5229	0.81	-1.2
94,202	-		GFF5229	0.81	-0.7
94,202	-		GFF5229	0.81	-0.2
94,347	+				+0.6
94,347	+				-0.1