Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4924 and GFF4925 overlap by 8 nucleotides GFF4925 and GFF4926 are separated by 69 nucleotides GFF4926 and GFF4927 are separated by 73 nucleotides
GFF4924 - Transmembrane component BioN of energizing module of biotin ECF transporter, at 15,832 to 16,425
GFF4924
GFF4925 - ATPase component BioM of energizing module of biotin ECF transporter, at 16,418 to 17,137
GFF4925
GFF4926 - Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23), at 17,207 to 18,049
GFF4926
GFF4927 - Citrate-proton symporter, at 18,123 to 19,418
GFF4927
Position (kb) 17
18
19 Strain fitness (log2 ratio) -2
-1
0
1
2 at 16.412 kb on + strand at 16.413 kb on - strand at 16.413 kb on - strand at 16.419 kb on + strand at 16.470 kb on + strand at 16.548 kb on + strand, within GFF4925 at 16.548 kb on + strand, within GFF4925 at 16.549 kb on - strand, within GFF4925 at 17.179 kb on - strand at 17.415 kb on + strand, within GFF4926 at 17.415 kb on + strand, within GFF4926 at 17.416 kb on - strand, within GFF4926 at 17.416 kb on - strand, within GFF4926 at 17.514 kb on + strand, within GFF4926 at 17.514 kb on + strand, within GFF4926 at 17.577 kb on + strand, within GFF4926 at 17.577 kb on + strand, within GFF4926 at 17.577 kb on + strand, within GFF4926 at 17.578 kb on - strand, within GFF4926 at 17.578 kb on - strand, within GFF4926 at 17.624 kb on + strand, within GFF4926 at 17.648 kb on + strand, within GFF4926 at 17.649 kb on - strand, within GFF4926 at 17.649 kb on - strand, within GFF4926 at 17.649 kb on - strand, within GFF4926 at 17.649 kb on - strand, within GFF4926 at 17.871 kb on + strand, within GFF4926 at 17.871 kb on + strand, within GFF4926 at 18.087 kb on + strand at 18.088 kb on - strand at 18.088 kb on - strand at 18.124 kb on + strand at 18.125 kb on - strand at 18.137 kb on - strand at 18.190 kb on + strand at 18.190 kb on + strand at 18.190 kb on + strand at 18.190 kb on + strand at 18.190 kb on + strand at 18.190 kb on + strand at 18.190 kb on + strand at 18.190 kb on + strand at 18.191 kb on - strand at 18.191 kb on - strand at 18.191 kb on - strand at 18.191 kb on - strand at 18.283 kb on + strand, within GFF4927 at 18.283 kb on + strand, within GFF4927 at 18.284 kb on - strand, within GFF4927 at 18.284 kb on - strand, within GFF4927 at 18.284 kb on - strand, within GFF4927 at 18.284 kb on - strand, within GFF4927 at 18.358 kb on + strand, within GFF4927 at 18.359 kb on - strand, within GFF4927 at 18.423 kb on - strand, within GFF4927 at 18.433 kb on + strand, within GFF4927 at 18.433 kb on + strand, within GFF4927 at 18.434 kb on - strand, within GFF4927 at 18.434 kb on - strand, within GFF4927 at 18.434 kb on - strand, within GFF4927 at 18.634 kb on + strand, within GFF4927 at 18.634 kb on + strand, within GFF4927 at 18.635 kb on - strand, within GFF4927 at 18.635 kb on - strand, within GFF4927 at 18.775 kb on + strand, within GFF4927 at 18.775 kb on + strand, within GFF4927 at 18.775 kb on + strand, within GFF4927 at 18.775 kb on + strand, within GFF4927 at 18.775 kb on + strand, within GFF4927 at 18.775 kb on + strand, within GFF4927 at 18.775 kb on + strand, within GFF4927 at 18.775 kb on + strand, within GFF4927 at 18.775 kb on + strand, within GFF4927 at 18.776 kb on - strand, within GFF4927 at 18.776 kb on - strand, within GFF4927 at 18.776 kb on - strand, within GFF4927 at 18.776 kb on - strand, within GFF4927 at 18.776 kb on - strand, within GFF4927 at 18.776 kb on - strand, within GFF4927 at 18.776 kb on - strand, within GFF4927 at 18.776 kb on - strand, within GFF4927 at 18.776 kb on - strand, within GFF4927 at 18.776 kb on - strand, within GFF4927
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 16,412 + -0.2 16,413 - +0.2 16,413 - -0.8 16,419 + +0.9 16,470 + +0.6 16,548 + GFF4925 0.18 +0.4 16,548 + GFF4925 0.18 +0.0 16,549 - GFF4925 0.18 +0.2 17,179 - +0.4 17,415 + GFF4926 0.25 -0.1 17,415 + GFF4926 0.25 -0.8 17,416 - GFF4926 0.25 +0.4 17,416 - GFF4926 0.25 +0.3 17,514 + GFF4926 0.36 +1.2 17,514 + GFF4926 0.36 -0.4 17,577 + GFF4926 0.44 +0.2 17,577 + GFF4926 0.44 -0.7 17,577 + GFF4926 0.44 +0.3 17,578 - GFF4926 0.44 +0.2 17,578 - GFF4926 0.44 -1.0 17,624 + GFF4926 0.49 +2.5 17,648 + GFF4926 0.52 -0.2 17,649 - GFF4926 0.52 +0.9 17,649 - GFF4926 0.52 -0.6 17,649 - GFF4926 0.52 +0.4 17,649 - GFF4926 0.52 +0.4 17,871 + GFF4926 0.79 +2.3 17,871 + GFF4926 0.79 +0.6 18,087 + +0.2 18,088 - +0.2 18,088 - -0.0 18,124 + -0.6 18,125 - +0.8 18,137 - -0.2 18,190 + -1.2 18,190 + -0.4 18,190 + -1.0 18,190 + +0.2 18,190 + -1.2 18,190 + +0.5 18,190 + -0.6 18,190 + +0.2 18,191 - +0.2 18,191 - +1.3 18,191 - -0.5 18,191 - +0.8 18,283 + GFF4927 0.12 -1.6 18,283 + GFF4927 0.12 -1.7 18,284 - GFF4927 0.12 +0.4 18,284 - GFF4927 0.12 -0.4 18,284 - GFF4927 0.12 -0.3 18,284 - GFF4927 0.12 +0.3 18,358 + GFF4927 0.18 -0.2 18,359 - GFF4927 0.18 +0.5 18,423 - GFF4927 0.23 +0.2 18,433 + GFF4927 0.24 -0.4 18,433 + GFF4927 0.24 -1.2 18,434 - GFF4927 0.24 -0.8 18,434 - GFF4927 0.24 -0.6 18,434 - GFF4927 0.24 +0.3 18,634 + GFF4927 0.39 -0.6 18,634 + GFF4927 0.39 -0.0 18,635 - GFF4927 0.40 +0.6 18,635 - GFF4927 0.40 +0.8 18,775 + GFF4927 0.50 -1.9 18,775 + GFF4927 0.50 +0.1 18,775 + GFF4927 0.50 +0.1 18,775 + GFF4927 0.50 -0.8 18,775 + GFF4927 0.50 +0.5 18,775 + GFF4927 0.50 -0.2 18,775 + GFF4927 0.50 +1.1 18,775 + GFF4927 0.50 +1.2 18,775 + GFF4927 0.50 -0.4 18,776 - GFF4927 0.50 -1.1 18,776 - GFF4927 0.50 -0.2 18,776 - GFF4927 0.50 -0.4 18,776 - GFF4927 0.50 +0.4 18,776 - GFF4927 0.50 -0.1 18,776 - GFF4927 0.50 +0.4 18,776 - GFF4927 0.50 -0.5 18,776 - GFF4927 0.50 -0.3 18,776 - GFF4927 0.50 +0.3 18,776 - GFF4927 0.50 +0.4
Or see this region's nucleotide sequence