Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4661 and GFF4662 are separated by 651 nucleotides GFF4662 and GFF4663 are separated by 106 nucleotides GFF4663 and GFF4664 are separated by 485 nucleotides
GFF4661 - no description, at 18,579 to 19,871
GFF4661
GFF4662 - no description, at 20,523 to 20,741
GFF4662
GFF4663 - no description, at 20,848 to 20,976
GFF4663
GFF4664 - hypothetical protein, at 21,462 to 22,073
GFF4664
Position (kb) 20
21 Strain fitness (log2 ratio) -2
-1
0
1
2 at 19.851 kb on + strand at 19.851 kb on + strand at 19.851 kb on + strand at 19.851 kb on + strand at 19.851 kb on + strand at 19.851 kb on + strand at 19.852 kb on - strand at 19.852 kb on - strand at 19.865 kb on - strand at 19.986 kb on + strand at 19.986 kb on + strand at 19.986 kb on + strand at 19.986 kb on + strand at 19.987 kb on - strand at 19.987 kb on - strand at 19.987 kb on - strand at 20.162 kb on + strand at 20.162 kb on + strand at 20.163 kb on - strand at 20.163 kb on - strand at 20.163 kb on - strand at 20.163 kb on - strand at 20.163 kb on - strand at 20.163 kb on - strand at 20.222 kb on + strand at 20.222 kb on + strand at 20.222 kb on + strand at 20.222 kb on + strand at 20.222 kb on + strand at 20.222 kb on + strand at 20.222 kb on + strand at 20.223 kb on - strand at 20.223 kb on - strand at 20.223 kb on - strand at 20.437 kb on - strand at 20.437 kb on - strand at 20.437 kb on - strand at 20.474 kb on + strand at 20.475 kb on - strand at 20.475 kb on - strand at 20.475 kb on - strand at 20.620 kb on - strand, within GFF4662 at 20.620 kb on - strand, within GFF4662 at 20.739 kb on + strand at 20.739 kb on + strand at 20.740 kb on - strand at 20.740 kb on - strand at 20.740 kb on - strand at 20.743 kb on + strand at 20.743 kb on + strand at 20.743 kb on + strand at 20.743 kb on + strand at 20.744 kb on - strand at 20.744 kb on - strand at 20.744 kb on - strand at 20.744 kb on - strand at 20.744 kb on - strand at 20.799 kb on + strand at 20.799 kb on + strand at 20.799 kb on + strand at 20.799 kb on + strand at 20.799 kb on + strand at 20.800 kb on - strand at 20.800 kb on - strand at 20.800 kb on - strand at 20.800 kb on - strand at 20.800 kb on - strand at 20.876 kb on + strand, within GFF4663 at 20.916 kb on - strand, within GFF4663 at 20.992 kb on + strand at 20.992 kb on + strand at 20.992 kb on + strand at 20.992 kb on + strand at 20.992 kb on + strand at 21.010 kb on + strand at 21.010 kb on + strand at 21.010 kb on + strand at 21.010 kb on + strand at 21.010 kb on + strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.011 kb on - strand at 21.053 kb on + strand at 21.053 kb on + strand at 21.054 kb on - strand at 21.054 kb on - strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.113 kb on + strand at 21.114 kb on - strand at 21.114 kb on - strand at 21.114 kb on - strand at 21.114 kb on - strand at 21.114 kb on - strand at 21.114 kb on - strand at 21.114 kb on - strand at 21.117 kb on + strand at 21.118 kb on - strand at 21.135 kb on + strand at 21.135 kb on + strand at 21.135 kb on + strand at 21.136 kb on - strand at 21.136 kb on - strand at 21.136 kb on - strand at 21.169 kb on + strand at 21.169 kb on + strand at 21.169 kb on + strand at 21.169 kb on + strand at 21.170 kb on - strand at 21.260 kb on - strand at 21.260 kb on - strand at 21.312 kb on - strand at 21.312 kb on - strand at 21.316 kb on + strand at 21.316 kb on + strand at 21.316 kb on + strand at 21.316 kb on + strand at 21.316 kb on + strand at 21.317 kb on - strand at 21.317 kb on - strand at 21.317 kb on - strand at 21.317 kb on - strand at 21.317 kb on - strand at 21.319 kb on + strand at 21.319 kb on + strand at 21.319 kb on + strand at 21.319 kb on + strand at 21.319 kb on + strand at 21.319 kb on + strand at 21.319 kb on + strand at 21.320 kb on - strand at 21.320 kb on - strand at 21.320 kb on - strand at 21.320 kb on - strand at 21.320 kb on - strand at 21.320 kb on - strand at 21.320 kb on - strand at 21.320 kb on - strand at 21.320 kb on - strand at 21.320 kb on - strand at 21.394 kb on + strand at 21.394 kb on + strand at 21.394 kb on + strand at 21.395 kb on - strand at 21.395 kb on - strand at 21.395 kb on - strand at 21.395 kb on - strand at 21.395 kb on - strand at 21.395 kb on - strand at 21.418 kb on + strand at 21.418 kb on + strand at 21.419 kb on - strand at 21.419 kb on - strand at 21.419 kb on - strand at 21.419 kb on - strand at 21.419 kb on - strand at 21.573 kb on + strand, within GFF4664 at 21.585 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.591 kb on + strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.592 kb on - strand, within GFF4664 at 21.737 kb on - strand, within GFF4664 at 21.737 kb on - strand, within GFF4664 at 21.737 kb on - strand, within GFF4664 at 21.835 kb on + strand, within GFF4664 at 21.835 kb on + strand, within GFF4664 at 21.835 kb on + strand, within GFF4664 at 21.835 kb on + strand, within GFF4664 at 21.836 kb on - strand, within GFF4664 at 21.836 kb on - strand, within GFF4664 at 21.836 kb on - strand, within GFF4664 at 21.836 kb on - strand, within GFF4664 at 21.836 kb on - strand, within GFF4664 at 21.858 kb on + strand, within GFF4664 at 21.858 kb on + strand, within GFF4664 at 21.858 kb on + strand, within GFF4664 at 21.859 kb on - strand, within GFF4664 at 21.859 kb on - strand, within GFF4664 at 21.859 kb on - strand, within GFF4664 at 21.859 kb on - strand, within GFF4664 at 21.859 kb on - strand, within GFF4664 at 21.859 kb on - strand, within GFF4664 at 21.859 kb on - strand, within GFF4664 at 21.870 kb on + strand, within GFF4664 at 21.870 kb on + strand, within GFF4664 at 21.870 kb on + strand, within GFF4664 at 21.870 kb on + strand, within GFF4664 at 21.871 kb on - strand, within GFF4664 at 21.871 kb on - strand, within GFF4664 at 21.922 kb on + strand, within GFF4664 at 21.922 kb on + strand, within GFF4664 at 21.922 kb on + strand, within GFF4664 at 21.923 kb on - strand, within GFF4664 at 21.923 kb on - strand, within GFF4664 at 21.923 kb on - strand, within GFF4664 at 21.923 kb on - strand, within GFF4664 at 21.923 kb on - strand, within GFF4664 at 21.923 kb on - strand, within GFF4664 at 21.923 kb on - strand, within GFF4664
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 19,851 + -1.2 19,851 + +0.1 19,851 + -0.3 19,851 + +0.6 19,851 + +0.7 19,851 + -0.2 19,852 - +0.3 19,852 - +0.0 19,865 - -1.7 19,986 + +0.0 19,986 + -0.9 19,986 + -0.1 19,986 + -0.2 19,987 - +0.3 19,987 - -0.5 19,987 - +2.4 20,162 + -0.3 20,162 + +0.2 20,163 - -0.5 20,163 - +0.4 20,163 - -0.3 20,163 - +0.4 20,163 - +0.1 20,163 - -0.1 20,222 + +0.4 20,222 + +0.9 20,222 + +0.3 20,222 + -0.3 20,222 + -0.1 20,222 + +0.3 20,222 + -1.4 20,223 - +0.4 20,223 - -0.3 20,223 - +0.7 20,437 - +0.0 20,437 - -0.1 20,437 - +0.7 20,474 + +0.3 20,475 - -0.2 20,475 - +0.4 20,475 - +0.1 20,620 - GFF4662 0.44 +0.3 20,620 - GFF4662 0.44 -1.9 20,739 + -0.5 20,739 + +0.1 20,740 - -0.8 20,740 - -1.9 20,740 - -0.2 20,743 + -0.6 20,743 + -0.2 20,743 + +0.1 20,743 + +1.3 20,744 - -0.4 20,744 - -0.7 20,744 - -0.1 20,744 - +0.9 20,744 - +0.1 20,799 + -0.7 20,799 + -0.7 20,799 + +0.8 20,799 + +0.1 20,799 + +0.2 20,800 - -0.1 20,800 - -0.2 20,800 - +0.1 20,800 - -1.2 20,800 - -0.1 20,876 + GFF4663 0.22 -1.2 20,916 - GFF4663 0.53 -1.3 20,992 + -1.0 20,992 + -0.6 20,992 + +0.2 20,992 + -1.4 20,992 + -0.2 21,010 + -0.3 21,010 + -0.7 21,010 + -0.3 21,010 + +0.1 21,010 + -0.3 21,011 - -1.6 21,011 - +0.1 21,011 - -0.6 21,011 - -0.4 21,011 - -0.3 21,011 - +0.3 21,011 - -0.8 21,011 - -1.3 21,011 - +0.3 21,011 - +0.1 21,011 - -0.2 21,053 + +0.4 21,053 + -0.7 21,054 - +0.8 21,054 - -0.7 21,113 + -0.7 21,113 + +0.3 21,113 + -0.4 21,113 + +0.3 21,113 + -1.6 21,113 + +0.4 21,113 + +0.2 21,113 + -0.5 21,113 + -0.2 21,113 + -0.3 21,113 + -0.5 21,113 + +0.1 21,113 + +0.1 21,114 - -0.2 21,114 - -0.3 21,114 - -0.7 21,114 - -0.7 21,114 - +1.3 21,114 - -1.4 21,114 - -0.2 21,117 + -0.0 21,118 - +0.5 21,135 + +0.1 21,135 + -0.2 21,135 + +1.3 21,136 - +1.5 21,136 - -0.2 21,136 - +0.5 21,169 + +0.4 21,169 + +0.1 21,169 + -0.3 21,169 + -0.5 21,170 - -0.0 21,260 - +0.0 21,260 - +0.6 21,312 - +0.2 21,312 - -0.3 21,316 + +0.2 21,316 + -0.4 21,316 + -0.2 21,316 + +0.1 21,316 + -1.3 21,317 - -1.1 21,317 - +0.0 21,317 - -0.4 21,317 - -0.5 21,317 - +0.3 21,319 + -0.5 21,319 + +0.4 21,319 + +0.4 21,319 + -1.7 21,319 + -1.1 21,319 + -0.4 21,319 + +1.0 21,320 - -0.1 21,320 - +0.1 21,320 - -0.4 21,320 - -0.8 21,320 - -0.5 21,320 - -0.3 21,320 - -0.4 21,320 - +0.3 21,320 - -1.2 21,320 - -0.4 21,394 + -0.5 21,394 + -0.2 21,394 + +1.2 21,395 - -1.2 21,395 - -0.8 21,395 - +0.9 21,395 - -0.2 21,395 - -0.8 21,395 - +0.6 21,418 + -0.2 21,418 + +1.0 21,419 - +0.9 21,419 - +0.2 21,419 - +0.1 21,419 - -0.7 21,419 - +0.5 21,573 + GFF4664 0.18 -0.5 21,585 + GFF4664 0.20 -2.4 21,591 + GFF4664 0.21 +0.9 21,591 + GFF4664 0.21 -0.1 21,591 + GFF4664 0.21 +0.3 21,591 + GFF4664 0.21 -0.1 21,591 + GFF4664 0.21 -0.8 21,591 + GFF4664 0.21 -0.8 21,591 + GFF4664 0.21 -1.3 21,591 + GFF4664 0.21 -0.3 21,591 + GFF4664 0.21 -0.3 21,591 + GFF4664 0.21 +0.3 21,591 + GFF4664 0.21 +1.0 21,591 + GFF4664 0.21 -0.9 21,591 + GFF4664 0.21 -0.8 21,591 + GFF4664 0.21 -0.2 21,591 + GFF4664 0.21 -1.0 21,591 + GFF4664 0.21 -0.2 21,591 + GFF4664 0.21 -0.3 21,591 + GFF4664 0.21 -0.3 21,591 + GFF4664 0.21 +0.4 21,591 + GFF4664 0.21 -0.2 21,591 + GFF4664 0.21 -0.7 21,592 - GFF4664 0.21 -0.4 21,592 - GFF4664 0.21 +0.9 21,592 - GFF4664 0.21 -0.6 21,592 - GFF4664 0.21 +1.8 21,592 - GFF4664 0.21 -0.3 21,592 - GFF4664 0.21 -1.2 21,592 - GFF4664 0.21 +0.7 21,592 - GFF4664 0.21 -0.9 21,592 - GFF4664 0.21 -0.7 21,592 - GFF4664 0.21 -1.1 21,592 - GFF4664 0.21 +0.5 21,592 - GFF4664 0.21 -1.4 21,592 - GFF4664 0.21 +0.8 21,592 - GFF4664 0.21 +0.1 21,592 - GFF4664 0.21 -0.4 21,592 - GFF4664 0.21 -1.9 21,592 - GFF4664 0.21 +0.5 21,592 - GFF4664 0.21 -1.1 21,592 - GFF4664 0.21 -1.3 21,592 - GFF4664 0.21 +0.6 21,592 - GFF4664 0.21 -0.5 21,592 - GFF4664 0.21 -1.0 21,592 - GFF4664 0.21 +0.0 21,592 - GFF4664 0.21 -0.3 21,592 - GFF4664 0.21 +0.6 21,592 - GFF4664 0.21 -0.2 21,592 - GFF4664 0.21 +0.8 21,592 - GFF4664 0.21 -1.7 21,737 - GFF4664 0.45 -0.1 21,737 - GFF4664 0.45 -0.4 21,737 - GFF4664 0.45 -0.5 21,835 + GFF4664 0.61 +0.6 21,835 + GFF4664 0.61 -1.7 21,835 + GFF4664 0.61 -0.3 21,835 + GFF4664 0.61 +0.4 21,836 - GFF4664 0.61 +0.7 21,836 - GFF4664 0.61 -0.7 21,836 - GFF4664 0.61 +1.9 21,836 - GFF4664 0.61 -0.0 21,836 - GFF4664 0.61 -0.5 21,858 + GFF4664 0.65 -0.2 21,858 + GFF4664 0.65 +1.0 21,858 + GFF4664 0.65 -0.7 21,859 - GFF4664 0.65 -0.1 21,859 - GFF4664 0.65 -0.5 21,859 - GFF4664 0.65 +0.1 21,859 - GFF4664 0.65 +1.0 21,859 - GFF4664 0.65 -0.1 21,859 - GFF4664 0.65 -1.4 21,859 - GFF4664 0.65 -0.4 21,870 + GFF4664 0.67 -0.3 21,870 + GFF4664 0.67 -0.2 21,870 + GFF4664 0.67 -1.5 21,870 + GFF4664 0.67 -0.7 21,871 - GFF4664 0.67 -0.3 21,871 - GFF4664 0.67 +0.4 21,922 + GFF4664 0.75 -0.7 21,922 + GFF4664 0.75 -2.3 21,922 + GFF4664 0.75 +0.8 21,923 - GFF4664 0.75 -0.2 21,923 - GFF4664 0.75 -0.8 21,923 - GFF4664 0.75 +1.0 21,923 - GFF4664 0.75 -0.2 21,923 - GFF4664 0.75 -0.2 21,923 - GFF4664 0.75 -0.1 21,923 - GFF4664 0.75 -0.2
Or see this region's nucleotide sequence