Strain Fitness in Variovorax sp. SCN45 around GFF4127

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
29,799	-		GFF4126	0.17	-0.6
30,736	-		GFF4127	0.19	-0.1
30,864	+		GFF4127	0.30	-1.5
31,076	-		GFF4127	0.50	-0.5
31,755	+				-0.2
31,755	+				+0.6
31,755	+				+0.0
31,756	-				+0.5
31,756	-				-0.6
31,896	+		GFF4128	0.14	-0.2
31,897	-		GFF4128	0.14	-0.9
31,948	-		GFF4128	0.17	+1.0
31,948	-		GFF4128	0.17	-1.2
32,041	-		GFF4128	0.23	-1.2
32,041	-		GFF4128	0.23	-1.7
32,041	-		GFF4128	0.23	-0.8
32,262	+		GFF4128	0.37	+0.6
32,263	-		GFF4128	0.37	+0.4
32,263	-		GFF4128	0.37	-0.7
32,317	-		GFF4128	0.40	+1.1
32,428	+		GFF4128	0.47	+2.1
32,436	+		GFF4128	0.47	+1.6
32,437	-		GFF4128	0.47	+1.6
32,601	+		GFF4128	0.57	-0.3
32,601	+		GFF4128	0.57	-3.0