Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2981 and GFF2982 overlap by 4 nucleotides GFF2982 and GFF2983 are separated by 14 nucleotides GFF2983 and GFF2984 are separated by 87 nucleotides
GFF2981 - no description, at 411,914 to 412,807
GFF2981
GFF2982 - Histone acetyltransferase HPA2 and related acetyltransferases, at 412,804 to 413,433
GFF2982
GFF2983 - Transcriptional regulator YfeR, LysR family, at 413,448 to 414,401
GFF2983
GFF2984 - Adenosine deaminase (EC 3.5.4.4), at 414,489 to 415,586
GFF2984
Position (kb) 413
414
415 Strain fitness (log2 ratio) -2
-1
0
1
2 at 412.619 kb on + strand, within GFF2981 at 412.619 kb on + strand, within GFF2981 at 412.619 kb on + strand, within GFF2981 at 412.620 kb on - strand, within GFF2981 at 412.620 kb on - strand, within GFF2981 at 413.029 kb on + strand, within GFF2982 at 413.029 kb on + strand, within GFF2982 at 413.029 kb on + strand, within GFF2982 at 413.029 kb on + strand, within GFF2982 at 413.030 kb on - strand, within GFF2982 at 413.030 kb on - strand, within GFF2982 at 413.030 kb on - strand, within GFF2982 at 413.030 kb on - strand, within GFF2982 at 413.030 kb on - strand, within GFF2982 at 413.030 kb on - strand, within GFF2982 at 413.030 kb on - strand, within GFF2982 at 413.030 kb on - strand, within GFF2982 at 413.030 kb on - strand, within GFF2982 at 413.035 kb on + strand, within GFF2982 at 413.036 kb on - strand, within GFF2982 at 413.036 kb on - strand, within GFF2982 at 413.036 kb on - strand, within GFF2982 at 413.036 kb on - strand, within GFF2982 at 413.071 kb on + strand, within GFF2982 at 413.072 kb on - strand, within GFF2982 at 413.072 kb on - strand, within GFF2982 at 413.093 kb on + strand, within GFF2982 at 413.094 kb on - strand, within GFF2982 at 413.094 kb on - strand, within GFF2982 at 413.094 kb on - strand, within GFF2982 at 413.094 kb on - strand, within GFF2982 at 413.094 kb on - strand, within GFF2982 at 413.143 kb on + strand, within GFF2982 at 413.144 kb on - strand, within GFF2982 at 413.144 kb on - strand, within GFF2982 at 413.155 kb on + strand, within GFF2982 at 413.155 kb on + strand, within GFF2982 at 413.155 kb on + strand, within GFF2982 at 413.155 kb on + strand, within GFF2982 at 413.185 kb on + strand, within GFF2982 at 413.279 kb on - strand, within GFF2982 at 413.320 kb on + strand, within GFF2982 at 413.320 kb on + strand, within GFF2982 at 413.320 kb on + strand, within GFF2982 at 413.321 kb on - strand, within GFF2982 at 413.321 kb on - strand, within GFF2982 at 413.321 kb on - strand, within GFF2982 at 413.321 kb on - strand, within GFF2982 at 413.572 kb on + strand, within GFF2983 at 413.572 kb on + strand, within GFF2983 at 413.653 kb on + strand, within GFF2983 at 413.653 kb on + strand, within GFF2983 at 413.653 kb on + strand, within GFF2983 at 413.653 kb on + strand, within GFF2983 at 413.653 kb on + strand, within GFF2983 at 413.653 kb on + strand, within GFF2983 at 413.653 kb on + strand, within GFF2983 at 413.654 kb on - strand, within GFF2983 at 413.654 kb on - strand, within GFF2983 at 413.654 kb on - strand, within GFF2983 at 413.654 kb on - strand, within GFF2983 at 413.654 kb on - strand, within GFF2983 at 413.654 kb on - strand, within GFF2983 at 413.654 kb on - strand, within GFF2983 at 413.654 kb on - strand, within GFF2983 at 413.654 kb on - strand, within GFF2983 at 413.701 kb on + strand, within GFF2983 at 413.702 kb on - strand, within GFF2983 at 413.716 kb on + strand, within GFF2983 at 414.459 kb on + strand at 414.473 kb on + strand at 414.473 kb on + strand at 414.473 kb on + strand at 414.474 kb on - strand at 414.476 kb on + strand at 414.476 kb on + strand at 414.476 kb on + strand at 414.477 kb on - strand at 414.477 kb on - strand at 414.654 kb on + strand, within GFF2984 at 414.654 kb on + strand, within GFF2984 at 414.655 kb on - strand, within GFF2984 at 414.655 kb on - strand, within GFF2984 at 414.655 kb on - strand, within GFF2984 at 414.738 kb on + strand, within GFF2984 at 414.739 kb on - strand, within GFF2984 at 414.739 kb on - strand, within GFF2984 at 414.756 kb on + strand, within GFF2984 at 414.756 kb on + strand, within GFF2984 at 414.757 kb on - strand, within GFF2984 at 414.757 kb on - strand, within GFF2984 at 414.789 kb on + strand, within GFF2984 at 414.789 kb on + strand, within GFF2984 at 415.062 kb on + strand, within GFF2984 at 415.182 kb on + strand, within GFF2984 at 415.182 kb on + strand, within GFF2984 at 415.183 kb on - strand, within GFF2984 at 415.183 kb on - strand, within GFF2984 at 415.183 kb on - strand, within GFF2984 at 415.206 kb on + strand, within GFF2984 at 415.206 kb on + strand, within GFF2984 at 415.247 kb on - strand, within GFF2984 at 415.247 kb on - strand, within GFF2984 at 415.247 kb on - strand, within GFF2984 at 415.247 kb on - strand, within GFF2984 at 415.263 kb on + strand, within GFF2984 at 415.263 kb on + strand, within GFF2984 at 415.263 kb on + strand, within GFF2984 at 415.263 kb on + strand, within GFF2984 at 415.264 kb on - strand, within GFF2984 at 415.264 kb on - strand, within GFF2984 at 415.264 kb on - strand, within GFF2984 at 415.264 kb on - strand, within GFF2984 at 415.266 kb on + strand, within GFF2984 at 415.266 kb on + strand, within GFF2984 at 415.266 kb on + strand, within GFF2984 at 415.266 kb on + strand, within GFF2984 at 415.266 kb on + strand, within GFF2984 at 415.267 kb on - strand, within GFF2984 at 415.267 kb on - strand, within GFF2984 at 415.267 kb on - strand, within GFF2984 at 415.267 kb on - strand, within GFF2984 at 415.267 kb on - strand, within GFF2984
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 412,619 + GFF2981 0.79 -0.8 412,619 + GFF2981 0.79 +0.5 412,619 + GFF2981 0.79 +0.0 412,620 - GFF2981 0.79 -0.5 412,620 - GFF2981 0.79 +0.1 413,029 + GFF2982 0.36 -0.1 413,029 + GFF2982 0.36 -0.8 413,029 + GFF2982 0.36 -1.5 413,029 + GFF2982 0.36 -0.2 413,030 - GFF2982 0.36 +1.3 413,030 - GFF2982 0.36 -1.5 413,030 - GFF2982 0.36 -0.8 413,030 - GFF2982 0.36 +0.7 413,030 - GFF2982 0.36 +0.2 413,030 - GFF2982 0.36 -0.7 413,030 - GFF2982 0.36 -0.7 413,030 - GFF2982 0.36 -0.5 413,030 - GFF2982 0.36 -0.1 413,035 + GFF2982 0.37 -0.6 413,036 - GFF2982 0.37 +2.5 413,036 - GFF2982 0.37 -0.8 413,036 - GFF2982 0.37 -0.5 413,036 - GFF2982 0.37 -0.3 413,071 + GFF2982 0.42 +0.4 413,072 - GFF2982 0.43 +0.1 413,072 - GFF2982 0.43 -0.8 413,093 + GFF2982 0.46 +1.1 413,094 - GFF2982 0.46 -0.3 413,094 - GFF2982 0.46 -1.3 413,094 - GFF2982 0.46 -1.6 413,094 - GFF2982 0.46 +0.5 413,094 - GFF2982 0.46 +0.2 413,143 + GFF2982 0.54 -0.4 413,144 - GFF2982 0.54 -0.6 413,144 - GFF2982 0.54 +0.3 413,155 + GFF2982 0.56 -0.2 413,155 + GFF2982 0.56 +0.2 413,155 + GFF2982 0.56 -0.3 413,155 + GFF2982 0.56 -0.7 413,185 + GFF2982 0.60 -0.6 413,279 - GFF2982 0.75 -0.2 413,320 + GFF2982 0.82 +1.5 413,320 + GFF2982 0.82 +1.1 413,320 + GFF2982 0.82 +0.0 413,321 - GFF2982 0.82 -1.1 413,321 - GFF2982 0.82 -0.9 413,321 - GFF2982 0.82 -0.1 413,321 - GFF2982 0.82 -1.0 413,572 + GFF2983 0.13 -0.9 413,572 + GFF2983 0.13 -1.1 413,653 + GFF2983 0.21 -0.3 413,653 + GFF2983 0.21 -0.0 413,653 + GFF2983 0.21 -0.5 413,653 + GFF2983 0.21 -0.8 413,653 + GFF2983 0.21 +0.1 413,653 + GFF2983 0.21 -0.0 413,653 + GFF2983 0.21 +0.1 413,654 - GFF2983 0.22 -0.3 413,654 - GFF2983 0.22 -1.4 413,654 - GFF2983 0.22 -0.3 413,654 - GFF2983 0.22 -0.3 413,654 - GFF2983 0.22 -0.5 413,654 - GFF2983 0.22 -0.6 413,654 - GFF2983 0.22 -0.7 413,654 - GFF2983 0.22 -0.1 413,654 - GFF2983 0.22 -0.7 413,701 + GFF2983 0.27 +1.5 413,702 - GFF2983 0.27 +0.2 413,716 + GFF2983 0.28 +0.5 414,459 + +0.5 414,473 + -1.1 414,473 + -1.9 414,473 + -1.5 414,474 - +0.7 414,476 + +0.1 414,476 + -0.6 414,476 + -1.3 414,477 - +0.2 414,477 - -0.9 414,654 + GFF2984 0.15 +0.7 414,654 + GFF2984 0.15 -0.8 414,655 - GFF2984 0.15 +0.3 414,655 - GFF2984 0.15 -0.0 414,655 - GFF2984 0.15 -0.6 414,738 + GFF2984 0.23 +0.9 414,739 - GFF2984 0.23 -0.0 414,739 - GFF2984 0.23 -0.2 414,756 + GFF2984 0.24 -0.3 414,756 + GFF2984 0.24 -0.6 414,757 - GFF2984 0.24 +0.6 414,757 - GFF2984 0.24 -0.9 414,789 + GFF2984 0.27 +0.5 414,789 + GFF2984 0.27 -1.0 415,062 + GFF2984 0.52 -1.0 415,182 + GFF2984 0.63 +0.2 415,182 + GFF2984 0.63 -1.0 415,183 - GFF2984 0.63 -0.5 415,183 - GFF2984 0.63 -0.6 415,183 - GFF2984 0.63 -1.8 415,206 + GFF2984 0.65 -0.6 415,206 + GFF2984 0.65 -0.9 415,247 - GFF2984 0.69 -0.3 415,247 - GFF2984 0.69 -0.3 415,247 - GFF2984 0.69 -0.8 415,247 - GFF2984 0.69 -1.0 415,263 + GFF2984 0.70 -0.9 415,263 + GFF2984 0.70 +1.0 415,263 + GFF2984 0.70 -0.2 415,263 + GFF2984 0.70 -0.1 415,264 - GFF2984 0.71 +0.5 415,264 - GFF2984 0.71 -2.2 415,264 - GFF2984 0.71 -0.5 415,264 - GFF2984 0.71 +0.1 415,266 + GFF2984 0.71 +0.2 415,266 + GFF2984 0.71 +0.3 415,266 + GFF2984 0.71 -0.2 415,266 + GFF2984 0.71 +1.0 415,266 + GFF2984 0.71 -0.8 415,267 - GFF2984 0.71 +0.2 415,267 - GFF2984 0.71 +0.2 415,267 - GFF2984 0.71 -0.3 415,267 - GFF2984 0.71 -0.8 415,267 - GFF2984 0.71 -0.5
Or see this region's nucleotide sequence