Strain Fitness in Variovorax sp. SCN45 around GFF106

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
133,192	+				-1.1
133,192	+				-0.2
133,193	-				+1.5
133,784	-				-0.8
133,930	-		GFF106	0.16	+0.6
134,087	+		GFF106	0.30	-0.6
134,088	-		GFF106	0.30	-0.7
134,166	+		GFF106	0.37	-0.8
134,166	+		GFF106	0.37	-0.5
134,167	-		GFF106	0.37	-0.7
134,338	+		GFF106	0.52	+0.4
134,440	+		GFF106	0.61	-0.2
134,440	+		GFF106	0.61	-0.9
134,440	+		GFF106	0.61	+0.6
134,723	+		GFF106	0.85	-1.4
134,723	+		GFF106	0.85	-0.9
134,723	+		GFF106	0.85	-0.4
134,723	+		GFF106	0.85	+0.1
134,777	-				-0.2
135,623	+		GFF107	0.77	-1.3
135,623	+		GFF107	0.77	-0.5