Experiment: K20
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yabI and HEPCGN_08755 are separated by 154 nucleotides HEPCGN_08755 and HEPCGN_08760 are separated by 6 nucleotides HEPCGN_08760 and araC are separated by 513 nucleotides
HEPCGN_08750: yabI - Inner membrane protein YabI, at 490,035 to 490,799
yabI
HEPCGN_08755: HEPCGN_08755 - hypothetical protein, at 490,954 to 491,376
_08755
HEPCGN_08760: HEPCGN_08760 - hypothetical protein, at 491,383 to 492,231
_08760
HEPCGN_08765: araC - arabinose operon transcriptional regulator AraC, at 492,745 to 493,590
araC
Position (kb) 491
492
493 Strain fitness (log2 ratio) -2
-1
0
1 at 490.639 kb on - strand, within yabI at 490.678 kb on - strand, within yabI at 490.757 kb on - strand at 490.757 kb on - strand at 490.773 kb on - strand at 490.776 kb on - strand at 490.799 kb on + strand at 490.799 kb on + strand at 490.799 kb on + strand at 490.842 kb on + strand at 490.843 kb on - strand at 490.843 kb on - strand at 490.848 kb on - strand at 490.848 kb on - strand at 491.044 kb on - strand, within HEPCGN_08755 at 491.152 kb on - strand, within HEPCGN_08755 at 491.555 kb on - strand, within HEPCGN_08760 at 491.717 kb on - strand, within HEPCGN_08760 at 491.843 kb on + strand, within HEPCGN_08760 at 491.898 kb on - strand, within HEPCGN_08760 at 491.898 kb on - strand, within HEPCGN_08760 at 491.903 kb on - strand, within HEPCGN_08760 at 491.920 kb on + strand, within HEPCGN_08760 at 491.921 kb on - strand, within HEPCGN_08760 at 491.956 kb on - strand, within HEPCGN_08760 at 492.256 kb on + strand at 492.266 kb on - strand at 492.396 kb on + strand at 492.397 kb on - strand at 492.458 kb on - strand at 492.504 kb on - strand at 492.504 kb on - strand at 492.676 kb on + strand at 492.696 kb on - strand at 492.744 kb on - strand at 492.747 kb on - strand at 492.894 kb on + strand, within araC at 492.895 kb on - strand, within araC at 492.919 kb on + strand, within araC at 493.037 kb on + strand, within araC
Per-strain Table
Position Strand Gene LocusTag Fraction K20 remove 490,639 - yabI HEPCGN_08750 0.79 -0.6 490,678 - yabI HEPCGN_08750 0.84 +0.2 490,757 - -1.2 490,757 - +1.2 490,773 - -0.6 490,776 - +0.2 490,799 + -0.4 490,799 + -0.4 490,799 + -0.4 490,842 + -0.5 490,843 - +0.7 490,843 - -0.4 490,848 - +0.1 490,848 - -0.4 491,044 - HEPCGN_08755 0.21 -0.8 491,152 - HEPCGN_08755 0.47 +0.3 491,555 - HEPCGN_08760 0.20 +1.4 491,717 - HEPCGN_08760 0.39 +0.0 491,843 + HEPCGN_08760 0.54 -1.0 491,898 - HEPCGN_08760 0.61 -0.4 491,898 - HEPCGN_08760 0.61 +0.6 491,903 - HEPCGN_08760 0.61 -1.2 491,920 + HEPCGN_08760 0.63 -0.1 491,921 - HEPCGN_08760 0.63 -0.5 491,956 - HEPCGN_08760 0.67 -0.0 492,256 + -0.6 492,266 - +0.1 492,396 + -0.3 492,397 - +0.1 492,458 - -0.7 492,504 - -0.8 492,504 - -1.9 492,676 + +0.3 492,696 - +0.7 492,744 - -0.5 492,747 - +0.5 492,894 + araC HEPCGN_08765 0.18 +0.2 492,895 - araC HEPCGN_08765 0.18 -0.9 492,919 + araC HEPCGN_08765 0.21 +0.1 493,037 + araC HEPCGN_08765 0.35 -0.0
Or see this region's nucleotide sequence