Experiment: K20
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt lacZ and lacY are separated by 51 nucleotides lacY and lacA are separated by 56 nucleotides lacA and cynX are separated by 87 nucleotides
HEPCGN_07425: lacZ - beta-galactosidase, at 219,574 to 222,648
lacZ
HEPCGN_07430: lacY - lactose permease, at 222,700 to 223,953
lacY
HEPCGN_07435: lacA - galactoside O-acetyltransferase, at 224,010 to 224,630
lacA
HEPCGN_07440: cynX - cyanate transporter CynX, at 224,718 to 225,899
cynX
Position (kb) 222
223
224 Strain fitness (log2 ratio) -1
0
1
2 at 221.835 kb on + strand, within lacZ at 221.985 kb on + strand, within lacZ at 222.060 kb on + strand, within lacZ at 222.060 kb on + strand, within lacZ at 222.061 kb on - strand, within lacZ at 222.061 kb on - strand, within lacZ at 222.085 kb on - strand, within lacZ at 222.126 kb on + strand, within lacZ at 222.126 kb on + strand, within lacZ at 222.156 kb on + strand, within lacZ at 222.191 kb on + strand, within lacZ at 222.275 kb on + strand, within lacZ at 222.352 kb on + strand at 222.352 kb on + strand at 222.352 kb on + strand at 222.353 kb on - strand at 222.353 kb on - strand at 222.353 kb on - strand at 222.353 kb on - strand at 222.353 kb on - strand at 222.353 kb on - strand at 222.361 kb on + strand at 222.361 kb on + strand at 222.412 kb on + strand at 222.412 kb on + strand at 222.617 kb on - strand at 222.649 kb on + strand at 223.083 kb on + strand, within lacY at 223.195 kb on - strand, within lacY at 223.323 kb on + strand, within lacY at 223.381 kb on + strand, within lacY at 223.381 kb on + strand, within lacY at 223.381 kb on + strand, within lacY at 223.382 kb on - strand, within lacY at 223.382 kb on - strand, within lacY at 223.382 kb on - strand, within lacY at 223.382 kb on - strand, within lacY at 223.405 kb on + strand, within lacY at 223.406 kb on - strand, within lacY at 223.406 kb on - strand, within lacY at 223.406 kb on - strand, within lacY at 223.513 kb on - strand, within lacY at 223.525 kb on - strand, within lacY at 223.593 kb on + strand, within lacY at 223.594 kb on - strand, within lacY at 223.601 kb on + strand, within lacY at 223.606 kb on - strand, within lacY at 223.665 kb on + strand, within lacY at 223.665 kb on + strand, within lacY at 223.666 kb on - strand, within lacY at 223.677 kb on - strand, within lacY at 223.701 kb on + strand, within lacY at 223.748 kb on - strand, within lacY at 223.791 kb on + strand, within lacY at 223.812 kb on + strand, within lacY at 223.817 kb on - strand, within lacY at 223.951 kb on + strand at 223.999 kb on - strand at 224.060 kb on - strand at 224.063 kb on + strand at 224.070 kb on - strand at 224.070 kb on - strand at 224.071 kb on + strand at 224.251 kb on + strand, within lacA at 224.252 kb on - strand, within lacA at 224.368 kb on + strand, within lacA at 224.401 kb on - strand, within lacA at 224.592 kb on + strand at 224.592 kb on + strand at 224.598 kb on + strand at 224.607 kb on + strand at 224.632 kb on + strand at 224.632 kb on + strand at 224.644 kb on + strand at 224.695 kb on + strand at 224.773 kb on - strand at 224.773 kb on - strand at 224.773 kb on - strand at 224.824 kb on + strand at 224.837 kb on + strand, within cynX at 224.838 kb on - strand, within cynX at 224.838 kb on - strand, within cynX at 224.841 kb on - strand, within cynX at 224.882 kb on + strand, within cynX
Per-strain Table
Position Strand Gene LocusTag Fraction K20 remove 221,835 + lacZ HEPCGN_07425 0.74 -0.0 221,985 + lacZ HEPCGN_07425 0.78 -0.3 222,060 + lacZ HEPCGN_07425 0.81 -0.4 222,060 + lacZ HEPCGN_07425 0.81 +0.4 222,061 - lacZ HEPCGN_07425 0.81 -0.4 222,061 - lacZ HEPCGN_07425 0.81 -0.2 222,085 - lacZ HEPCGN_07425 0.82 +0.5 222,126 + lacZ HEPCGN_07425 0.83 +0.3 222,126 + lacZ HEPCGN_07425 0.83 -0.0 222,156 + lacZ HEPCGN_07425 0.84 -0.8 222,191 + lacZ HEPCGN_07425 0.85 +0.1 222,275 + lacZ HEPCGN_07425 0.88 -1.3 222,352 + +1.2 222,352 + +1.0 222,352 + +0.0 222,353 - -0.5 222,353 - -0.1 222,353 - +0.1 222,353 - -0.1 222,353 - +0.3 222,353 - +0.3 222,361 + +1.0 222,361 + +0.2 222,412 + +0.2 222,412 + +1.0 222,617 - +0.9 222,649 + +0.0 223,083 + lacY HEPCGN_07430 0.31 +0.0 223,195 - lacY HEPCGN_07430 0.39 -1.1 223,323 + lacY HEPCGN_07430 0.50 -0.4 223,381 + lacY HEPCGN_07430 0.54 -0.6 223,381 + lacY HEPCGN_07430 0.54 +0.5 223,381 + lacY HEPCGN_07430 0.54 +0.5 223,382 - lacY HEPCGN_07430 0.54 -0.6 223,382 - lacY HEPCGN_07430 0.54 -0.5 223,382 - lacY HEPCGN_07430 0.54 -0.1 223,382 - lacY HEPCGN_07430 0.54 +0.0 223,405 + lacY HEPCGN_07430 0.56 -0.3 223,406 - lacY HEPCGN_07430 0.56 -0.5 223,406 - lacY HEPCGN_07430 0.56 -0.3 223,406 - lacY HEPCGN_07430 0.56 -0.2 223,513 - lacY HEPCGN_07430 0.65 -0.1 223,525 - lacY HEPCGN_07430 0.66 +0.0 223,593 + lacY HEPCGN_07430 0.71 -0.1 223,594 - lacY HEPCGN_07430 0.71 +0.2 223,601 + lacY HEPCGN_07430 0.72 -1.1 223,606 - lacY HEPCGN_07430 0.72 -0.5 223,665 + lacY HEPCGN_07430 0.77 -0.3 223,665 + lacY HEPCGN_07430 0.77 -0.7 223,666 - lacY HEPCGN_07430 0.77 +1.2 223,677 - lacY HEPCGN_07430 0.78 -0.8 223,701 + lacY HEPCGN_07430 0.80 -1.2 223,748 - lacY HEPCGN_07430 0.84 +1.7 223,791 + lacY HEPCGN_07430 0.87 +2.0 223,812 + lacY HEPCGN_07430 0.89 -0.6 223,817 - lacY HEPCGN_07430 0.89 -0.4 223,951 + -0.1 223,999 - -0.5 224,060 - -0.7 224,063 + +0.4 224,070 - +0.1 224,070 - -0.2 224,071 + +0.6 224,251 + lacA HEPCGN_07435 0.39 -0.4 224,252 - lacA HEPCGN_07435 0.39 -1.4 224,368 + lacA HEPCGN_07435 0.58 +0.0 224,401 - lacA HEPCGN_07435 0.63 -0.2 224,592 + -0.5 224,592 + -0.4 224,598 + -0.2 224,607 + +1.8 224,632 + -0.1 224,632 + +0.7 224,644 + +0.0 224,695 + -0.1 224,773 - +0.2 224,773 - +0.5 224,773 - +0.1 224,824 + -0.7 224,837 + cynX HEPCGN_07440 0.10 -0.5 224,838 - cynX HEPCGN_07440 0.10 -0.4 224,838 - cynX HEPCGN_07440 0.10 -0.5 224,841 - cynX HEPCGN_07440 0.10 +0.3 224,882 + cynX HEPCGN_07440 0.14 +0.3
Or see this region's nucleotide sequence