Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF978 and GFF979 are separated by 179 nucleotides GFF979 and GFF980 are separated by 53 nucleotides
GFF978 - Propionate--CoA ligase (EC 6.2.1.17), at 292,969 to 294,882
GFF978
GFF979 - 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2), at 295,062 to 297,938
GFF979
GFF980 - Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61), at 297,992 to 299,263
GFF980
Position (kb) 295
296
297
298 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.142 kb on + strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.143 kb on - strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.235 kb on + strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.236 kb on - strand, within GFF978 at 294.382 kb on + strand, within GFF978 at 294.382 kb on + strand, within GFF978 at 294.382 kb on + strand, within GFF978 at 294.382 kb on + strand, within GFF978 at 294.382 kb on + strand, within GFF978 at 294.382 kb on + strand, within GFF978 at 294.383 kb on - strand, within GFF978 at 294.383 kb on - strand, within GFF978 at 294.383 kb on - strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.412 kb on + strand, within GFF978 at 294.413 kb on - strand, within GFF978 at 294.413 kb on - strand, within GFF978 at 294.413 kb on - strand, within GFF978 at 294.413 kb on - strand, within GFF978 at 294.413 kb on - strand, within GFF978 at 294.413 kb on - strand, within GFF978 at 294.451 kb on + strand, within GFF978 at 294.451 kb on + strand, within GFF978 at 294.451 kb on + strand, within GFF978 at 294.452 kb on - strand, within GFF978 at 294.455 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.457 kb on + strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.458 kb on - strand, within GFF978 at 294.471 kb on + strand, within GFF978 at 294.471 kb on + strand, within GFF978 at 294.471 kb on + strand, within GFF978 at 294.472 kb on - strand, within GFF978 at 294.866 kb on + strand at 294.866 kb on + strand at 294.866 kb on + strand at 294.866 kb on + strand at 294.866 kb on + strand at 294.866 kb on + strand at 294.867 kb on - strand at 294.867 kb on - strand at 294.867 kb on - strand at 294.867 kb on - strand at 294.867 kb on - strand at 294.867 kb on - strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.905 kb on + strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.906 kb on - strand at 294.924 kb on + strand at 294.924 kb on + strand at 294.924 kb on + strand at 294.924 kb on + strand at 294.924 kb on + strand at 294.924 kb on + strand at 294.925 kb on - strand at 294.925 kb on - strand at 294.925 kb on - strand at 294.925 kb on - strand at 294.925 kb on - strand at 294.925 kb on - strand at 294.925 kb on - strand at 294.925 kb on - strand at 294.925 kb on - strand at 294.925 kb on - strand at 294.951 kb on + strand at 294.951 kb on + strand at 294.951 kb on + strand at 294.951 kb on + strand at 294.951 kb on + strand at 294.951 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.936 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand at 297.939 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 294,142 + GFF978 0.61 -0.1 294,142 + GFF978 0.61 -0.2 294,142 + GFF978 0.61 -0.2 294,142 + GFF978 0.61 -0.6 294,142 + GFF978 0.61 -0.9 294,142 + GFF978 0.61 -0.7 294,142 + GFF978 0.61 -0.1 294,142 + GFF978 0.61 -0.9 294,142 + GFF978 0.61 +1.4 294,142 + GFF978 0.61 -0.4 294,142 + GFF978 0.61 +1.0 294,142 + GFF978 0.61 -1.3 294,142 + GFF978 0.61 +0.2 294,142 + GFF978 0.61 +0.1 294,143 - GFF978 0.61 -0.1 294,143 - GFF978 0.61 -0.7 294,143 - GFF978 0.61 +1.9 294,143 - GFF978 0.61 -2.9 294,143 - GFF978 0.61 +0.2 294,143 - GFF978 0.61 +0.0 294,143 - GFF978 0.61 +0.4 294,143 - GFF978 0.61 -2.6 294,143 - GFF978 0.61 -1.0 294,143 - GFF978 0.61 -0.2 294,143 - GFF978 0.61 -0.1 294,143 - GFF978 0.61 -0.8 294,235 + GFF978 0.66 +0.7 294,235 + GFF978 0.66 +0.4 294,235 + GFF978 0.66 -0.2 294,235 + GFF978 0.66 -0.2 294,235 + GFF978 0.66 +0.2 294,235 + GFF978 0.66 +0.1 294,235 + GFF978 0.66 -0.3 294,235 + GFF978 0.66 -0.6 294,235 + GFF978 0.66 -0.1 294,235 + GFF978 0.66 -0.1 294,235 + GFF978 0.66 +0.4 294,235 + GFF978 0.66 -0.4 294,235 + GFF978 0.66 -0.7 294,235 + GFF978 0.66 +1.4 294,235 + GFF978 0.66 +0.0 294,235 + GFF978 0.66 -0.4 294,235 + GFF978 0.66 -0.8 294,235 + GFF978 0.66 +0.6 294,235 + GFF978 0.66 -0.4 294,235 + GFF978 0.66 -1.0 294,235 + GFF978 0.66 +0.1 294,236 - GFF978 0.66 +0.0 294,236 - GFF978 0.66 -2.2 294,236 - GFF978 0.66 -0.8 294,236 - GFF978 0.66 -0.8 294,236 - GFF978 0.66 -0.7 294,236 - GFF978 0.66 -0.2 294,236 - GFF978 0.66 +0.7 294,236 - GFF978 0.66 +0.3 294,236 - GFF978 0.66 -0.2 294,236 - GFF978 0.66 +0.2 294,236 - GFF978 0.66 +0.1 294,236 - GFF978 0.66 +1.1 294,236 - GFF978 0.66 -0.5 294,236 - GFF978 0.66 +1.2 294,236 - GFF978 0.66 +0.1 294,236 - GFF978 0.66 -0.9 294,382 + GFF978 0.74 +0.4 294,382 + GFF978 0.74 -0.9 294,382 + GFF978 0.74 +1.0 294,382 + GFF978 0.74 +0.1 294,382 + GFF978 0.74 +1.4 294,382 + GFF978 0.74 -0.1 294,383 - GFF978 0.74 +0.1 294,383 - GFF978 0.74 +0.8 294,383 - GFF978 0.74 -1.5 294,412 + GFF978 0.75 +0.8 294,412 + GFF978 0.75 -0.4 294,412 + GFF978 0.75 -0.0 294,412 + GFF978 0.75 +1.0 294,412 + GFF978 0.75 -0.1 294,412 + GFF978 0.75 +1.4 294,412 + GFF978 0.75 +0.1 294,412 + GFF978 0.75 -0.5 294,412 + GFF978 0.75 +1.4 294,412 + GFF978 0.75 +0.5 294,412 + GFF978 0.75 +0.3 294,413 - GFF978 0.75 +0.1 294,413 - GFF978 0.75 +1.5 294,413 - GFF978 0.75 -1.3 294,413 - GFF978 0.75 +0.4 294,413 - GFF978 0.75 -1.6 294,413 - GFF978 0.75 +0.1 294,451 + GFF978 0.77 -1.6 294,451 + GFF978 0.77 +0.2 294,451 + GFF978 0.77 -0.6 294,452 - GFF978 0.77 -0.2 294,455 + GFF978 0.78 +0.8 294,457 + GFF978 0.78 -0.2 294,457 + GFF978 0.78 +0.4 294,457 + GFF978 0.78 -2.7 294,457 + GFF978 0.78 -0.3 294,457 + GFF978 0.78 +0.5 294,457 + GFF978 0.78 +0.3 294,457 + GFF978 0.78 -0.6 294,457 + GFF978 0.78 +0.2 294,457 + GFF978 0.78 +0.0 294,457 + GFF978 0.78 -0.1 294,457 + GFF978 0.78 -0.4 294,457 + GFF978 0.78 -0.8 294,457 + GFF978 0.78 +2.4 294,458 - GFF978 0.78 -0.5 294,458 - GFF978 0.78 +1.4 294,458 - GFF978 0.78 -0.2 294,458 - GFF978 0.78 +1.5 294,458 - GFF978 0.78 +0.1 294,458 - GFF978 0.78 -1.1 294,458 - GFF978 0.78 -0.7 294,458 - GFF978 0.78 -0.1 294,458 - GFF978 0.78 +0.5 294,458 - GFF978 0.78 -0.9 294,458 - GFF978 0.78 -0.6 294,458 - GFF978 0.78 +0.1 294,458 - GFF978 0.78 -0.2 294,458 - GFF978 0.78 -1.0 294,458 - GFF978 0.78 -0.4 294,458 - GFF978 0.78 +0.3 294,458 - GFF978 0.78 +0.3 294,458 - GFF978 0.78 -0.1 294,458 - GFF978 0.78 -0.3 294,458 - GFF978 0.78 -0.3 294,458 - GFF978 0.78 -0.1 294,471 + GFF978 0.78 +0.6 294,471 + GFF978 0.78 -0.3 294,471 + GFF978 0.78 +0.5 294,472 - GFF978 0.79 +2.4 294,866 + -0.3 294,866 + -0.8 294,866 + +1.1 294,866 + +0.0 294,866 + +0.0 294,866 + +0.1 294,867 - -1.3 294,867 - -0.7 294,867 - -1.0 294,867 - -1.0 294,867 - +1.4 294,867 - -0.5 294,905 + -1.6 294,905 + +1.7 294,905 + -0.5 294,905 + -1.1 294,905 + -0.6 294,905 + -1.0 294,905 + +0.0 294,905 + +0.5 294,905 + +0.1 294,905 + +0.9 294,905 + -0.3 294,905 + -0.1 294,905 + -0.7 294,905 + +0.0 294,905 + -0.0 294,905 + +1.4 294,905 + +0.7 294,905 + -2.0 294,906 - +0.9 294,906 - +0.2 294,906 - -2.5 294,906 - -1.1 294,906 - +0.1 294,906 - -0.2 294,906 - -0.1 294,906 - +0.8 294,906 - -0.1 294,906 - -0.2 294,906 - -1.3 294,906 - -0.4 294,906 - -0.4 294,906 - +0.1 294,906 - -1.7 294,924 + +0.5 294,924 + -0.1 294,924 + -0.8 294,924 + -0.4 294,924 + +0.9 294,924 + -0.5 294,925 - +1.2 294,925 - +2.9 294,925 - -0.8 294,925 - -0.1 294,925 - -0.9 294,925 - -0.5 294,925 - +0.0 294,925 - -0.2 294,925 - -0.3 294,925 - -0.4 294,951 + -0.2 294,951 + +1.4 294,951 + -0.2 294,951 + -0.3 294,951 + -0.8 294,951 + +0.1 297,936 + -0.2 297,936 + -0.0 297,936 + -1.6 297,936 + -0.6 297,936 + -0.3 297,936 + -0.1 297,936 + +0.0 297,936 + -0.1 297,936 + -1.5 297,936 + -0.6 297,936 + +0.1 297,936 + -1.6 297,936 + -1.0 297,936 + -0.5 297,936 + +0.4 297,936 + +0.3 297,936 + -0.6 297,936 + -0.9 297,936 + -0.4 297,939 + -0.7 297,939 + -0.1 297,939 + -0.5 297,939 + -1.0 297,939 + -0.8 297,939 + +0.4 297,939 + +0.1 297,939 + +0.1 297,939 + +0.2 297,939 + +0.6 297,939 + +0.9 297,939 + -0.6
Or see this region's nucleotide sequence