Strain Fitness in Variovorax sp. SCN45 around GFF965

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
275,814	+				-0.0
275,814	+				-0.4
275,814	+				-1.0
275,814	+				-0.1
275,814	+				-0.9
275,814	+				-0.7
275,814	+				-0.1
275,814	+				-0.4
275,815	-				-0.1
275,815	-				-1.0
275,815	-				-0.1
275,815	-				-0.2
275,815	-				-0.8
275,815	-				-0.9
276,683	+				+1.9
276,735	+				-1.0
276,736	-				+0.2
276,736	-				+0.1
276,736	-				+0.7
276,736	-				-0.6
276,736	-				-0.1
276,736	-				-0.4
276,736	-				-0.2
276,742	+				+0.3
276,742	+				-0.1
276,742	+				+0.9
276,742	+				+0.5
276,742	+				+0.5
276,742	+				+0.8
276,742	+				-0.8
276,742	+				+1.0
276,743	-				-0.1
276,743	-				+0.2
276,743	-				-0.3
277,235	-		GFF965	0.78	-1.2
277,280	-		GFF965	0.85	+1.4
277,343	-				-2.3
277,343	-				+0.4
277,380	-				+3.7
277,380	-				-1.2
277,380	-				-1.2
277,397	-				-1.4
277,397	-				-1.0
277,397	-				+0.1
277,397	-				-0.6
277,400	+				+0.4
277,471	-				-0.6
277,471	-				-1.6
277,471	-				-1.4
277,576	-				-2.2
278,047	-		GFF966	0.27	-1.3
278,047	-		GFF966	0.27	-1.8