Strain Fitness in Variovorax sp. SCN45 around GFF91

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
106,460	+				+0.4
106,460	+				-0.5
106,460	+				-0.4
106,461	-				+0.0
106,461	-				-0.4
106,955	+				-0.3
106,955	+				-0.7
106,957	+				-0.2
106,957	+				-0.3
107,621	+				-0.2
107,622	-				+0.7
107,684	+		GFF92	0.17	-1.8
107,684	+		GFF92	0.17	+0.3
107,684	+		GFF92	0.17	+0.2
107,684	+		GFF92	0.17	-0.2
107,685	-		GFF92	0.17	+0.6
107,685	-		GFF92	0.17	-0.6
108,013	+				-0.4
108,014	-				-1.3
108,014	-				-0.5
108,497	+				-0.2
108,498	-				-0.6
108,498	-				+1.1
108,498	-				+0.5
108,498	-				+1.0
108,558	-				+0.9