Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7452 and GFF7453 are separated by 125 nucleotides
GFF7452 - Insertion element IS407 (Burkholderia multivorans) transposase, at 69 to 335
GFF7452
GFF7453 - Transposase, at 461 to 1,204
GFF7453
Position (kb) 0
1 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.084 kb on + strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.085 kb on - strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.086 kb on + strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.087 kb on - strand at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.183 kb on + strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.184 kb on - strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.201 kb on + strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.202 kb on - strand, within GFF7452 at 0.325 kb on + strand at 0.326 kb on - strand at 0.333 kb on + strand at 0.581 kb on + strand, within GFF7453 at 0.581 kb on + strand, within GFF7453 at 0.581 kb on + strand, within GFF7453 at 0.582 kb on - strand, within GFF7453 at 0.590 kb on + strand, within GFF7453 at 0.590 kb on + strand, within GFF7453 at 0.590 kb on + strand, within GFF7453 at 0.590 kb on + strand, within GFF7453 at 0.590 kb on + strand, within GFF7453 at 0.591 kb on - strand, within GFF7453 at 0.591 kb on - strand, within GFF7453 at 0.591 kb on - strand, within GFF7453 at 0.591 kb on - strand, within GFF7453 at 0.591 kb on - strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.812 kb on + strand, within GFF7453 at 0.813 kb on - strand, within GFF7453 at 0.813 kb on - strand, within GFF7453 at 0.813 kb on - strand, within GFF7453 at 0.813 kb on - strand, within GFF7453 at 0.813 kb on - strand, within GFF7453 at 0.813 kb on - strand, within GFF7453 at 0.813 kb on - strand, within GFF7453 at 0.813 kb on - strand, within GFF7453 at 0.977 kb on + strand, within GFF7453 at 0.977 kb on + strand, within GFF7453 at 0.977 kb on + strand, within GFF7453 at 0.977 kb on + strand, within GFF7453 at 0.978 kb on - strand, within GFF7453 at 0.978 kb on - strand, within GFF7453 at 0.978 kb on - strand, within GFF7453 at 0.978 kb on - strand, within GFF7453 at 0.978 kb on - strand, within GFF7453 at 0.978 kb on - strand, within GFF7453 at 0.978 kb on - strand, within GFF7453 at 0.978 kb on - strand, within GFF7453 at 0.978 kb on - strand, within GFF7453 at 1.082 kb on + strand, within GFF7453 at 1.082 kb on + strand, within GFF7453 at 1.082 kb on + strand, within GFF7453 at 1.082 kb on + strand, within GFF7453 at 1.082 kb on + strand, within GFF7453 at 1.082 kb on + strand, within GFF7453 at 1.082 kb on + strand, within GFF7453 at 1.082 kb on + strand, within GFF7453 at 1.082 kb on + strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.083 kb on - strand, within GFF7453 at 1.203 kb on - strand at 1.203 kb on - strand at 1.203 kb on - strand at 1.203 kb on - strand at 1.203 kb on - strand at 1.203 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 84 + +0.3 84 + -0.5 84 + -0.2 84 + -0.0 84 + -0.9 84 + +0.3 84 + +0.4 84 + +0.5 84 + +0.4 84 + -0.6 84 + -0.4 84 + -0.2 85 - +0.4 85 - -0.2 85 - -2.2 85 - +0.8 85 - -0.5 85 - -0.6 85 - -1.3 85 - -1.3 85 - +1.7 85 - +0.2 85 - -0.9 85 - +0.6 85 - +1.3 85 - -0.0 85 - +0.1 85 - +0.3 85 - -0.4 85 - +0.1 85 - +0.4 85 - -0.0 85 - +0.6 86 + -0.6 86 + +1.0 86 + +0.1 86 + -0.4 86 + -0.1 86 + +1.3 86 + -0.6 86 + -0.2 86 + -0.0 86 + -0.7 86 + -0.2 86 + +0.5 86 + -0.6 86 + +1.3 86 + +2.4 86 + +0.3 86 + +0.3 86 + +1.1 86 + +1.0 86 + +0.6 87 - -0.3 87 - -0.5 87 - -0.5 87 - -1.0 87 - +1.3 87 - -0.2 87 - -0.3 87 - -1.2 87 - -0.1 87 - +0.3 87 - -1.9 87 - -0.1 87 - +0.6 87 - +1.5 87 - -1.0 87 - -1.0 87 - -0.7 87 - -0.0 183 + GFF7452 0.43 -0.4 183 + GFF7452 0.43 -0.9 183 + GFF7452 0.43 +0.3 183 + GFF7452 0.43 -0.9 183 + GFF7452 0.43 -0.5 183 + GFF7452 0.43 +0.2 183 + GFF7452 0.43 +0.2 183 + GFF7452 0.43 -0.2 183 + GFF7452 0.43 -0.8 183 + GFF7452 0.43 -0.1 183 + GFF7452 0.43 +0.2 183 + GFF7452 0.43 -0.3 183 + GFF7452 0.43 -0.3 183 + GFF7452 0.43 -1.6 183 + GFF7452 0.43 +0.0 183 + GFF7452 0.43 -2.3 183 + GFF7452 0.43 -0.5 183 + GFF7452 0.43 -0.1 183 + GFF7452 0.43 -0.2 183 + GFF7452 0.43 +0.7 183 + GFF7452 0.43 +0.5 183 + GFF7452 0.43 +1.1 184 - GFF7452 0.43 -0.7 184 - GFF7452 0.43 +0.3 184 - GFF7452 0.43 -0.5 184 - GFF7452 0.43 +1.2 184 - GFF7452 0.43 -1.1 184 - GFF7452 0.43 +0.2 184 - GFF7452 0.43 -0.6 184 - GFF7452 0.43 -1.4 184 - GFF7452 0.43 -0.7 184 - GFF7452 0.43 +0.7 184 - GFF7452 0.43 -0.2 184 - GFF7452 0.43 -0.9 201 + GFF7452 0.49 -2.5 201 + GFF7452 0.49 -0.3 201 + GFF7452 0.49 -1.1 201 + GFF7452 0.49 +0.3 201 + GFF7452 0.49 +0.2 201 + GFF7452 0.49 -0.2 201 + GFF7452 0.49 +0.1 201 + GFF7452 0.49 -0.7 201 + GFF7452 0.49 +0.3 201 + GFF7452 0.49 +0.4 201 + GFF7452 0.49 -0.2 201 + GFF7452 0.49 -0.2 201 + GFF7452 0.49 -0.3 201 + GFF7452 0.49 +0.9 201 + GFF7452 0.49 -0.3 202 - GFF7452 0.50 -0.3 202 - GFF7452 0.50 +1.6 202 - GFF7452 0.50 +0.5 202 - GFF7452 0.50 -0.4 202 - GFF7452 0.50 -0.8 202 - GFF7452 0.50 +1.3 202 - GFF7452 0.50 +0.4 202 - GFF7452 0.50 +2.3 202 - GFF7452 0.50 +1.5 202 - GFF7452 0.50 +1.7 202 - GFF7452 0.50 -0.5 202 - GFF7452 0.50 -0.2 202 - GFF7452 0.50 -0.1 202 - GFF7452 0.50 +0.3 202 - GFF7452 0.50 -1.1 325 + -0.3 326 - -0.0 333 + -0.1 581 + GFF7453 0.16 +1.2 581 + GFF7453 0.16 +0.3 581 + GFF7453 0.16 +0.3 582 - GFF7453 0.16 -0.4 590 + GFF7453 0.17 -0.5 590 + GFF7453 0.17 +0.9 590 + GFF7453 0.17 +0.6 590 + GFF7453 0.17 +0.5 590 + GFF7453 0.17 +0.7 591 - GFF7453 0.17 -0.2 591 - GFF7453 0.17 +0.9 591 - GFF7453 0.17 +0.6 591 - GFF7453 0.17 +0.5 591 - GFF7453 0.17 -0.5 812 + GFF7453 0.47 -1.3 812 + GFF7453 0.47 +0.4 812 + GFF7453 0.47 +0.3 812 + GFF7453 0.47 +2.9 812 + GFF7453 0.47 +0.5 812 + GFF7453 0.47 -0.9 812 + GFF7453 0.47 -0.3 812 + GFF7453 0.47 +0.2 812 + GFF7453 0.47 +0.1 812 + GFF7453 0.47 -0.5 812 + GFF7453 0.47 -0.7 812 + GFF7453 0.47 -0.4 812 + GFF7453 0.47 +0.9 812 + GFF7453 0.47 +3.9 812 + GFF7453 0.47 +0.9 812 + GFF7453 0.47 +0.0 812 + GFF7453 0.47 +1.3 813 - GFF7453 0.47 -0.1 813 - GFF7453 0.47 +0.4 813 - GFF7453 0.47 +0.4 813 - GFF7453 0.47 -0.3 813 - GFF7453 0.47 -0.3 813 - GFF7453 0.47 -0.5 813 - GFF7453 0.47 -1.7 813 - GFF7453 0.47 -0.3 977 + GFF7453 0.69 +0.9 977 + GFF7453 0.69 +0.1 977 + GFF7453 0.69 +0.9 977 + GFF7453 0.69 +0.2 978 - GFF7453 0.69 -0.2 978 - GFF7453 0.69 -0.0 978 - GFF7453 0.69 +1.9 978 - GFF7453 0.69 +0.4 978 - GFF7453 0.69 -0.9 978 - GFF7453 0.69 +0.1 978 - GFF7453 0.69 -0.3 978 - GFF7453 0.69 -0.4 978 - GFF7453 0.69 -0.3 1,082 + GFF7453 0.83 -0.5 1,082 + GFF7453 0.83 -0.1 1,082 + GFF7453 0.83 +1.8 1,082 + GFF7453 0.83 +0.7 1,082 + GFF7453 0.83 +0.1 1,082 + GFF7453 0.83 +1.1 1,082 + GFF7453 0.83 +0.5 1,082 + GFF7453 0.83 +1.1 1,082 + GFF7453 0.83 +1.6 1,083 - GFF7453 0.84 -0.1 1,083 - GFF7453 0.84 -0.9 1,083 - GFF7453 0.84 +0.2 1,083 - GFF7453 0.84 +0.3 1,083 - GFF7453 0.84 +0.0 1,083 - GFF7453 0.84 +0.6 1,083 - GFF7453 0.84 -0.0 1,083 - GFF7453 0.84 +0.2 1,083 - GFF7453 0.84 -0.9 1,083 - GFF7453 0.84 -2.2 1,083 - GFF7453 0.84 +0.2 1,083 - GFF7453 0.84 -0.5 1,083 - GFF7453 0.84 -0.2 1,083 - GFF7453 0.84 -0.1 1,083 - GFF7453 0.84 +0.3 1,083 - GFF7453 0.84 +0.8 1,083 - GFF7453 0.84 +0.8 1,203 - +0.2 1,203 - -0.2 1,203 - -0.6 1,203 - -0.1 1,203 - +0.6 1,203 - +0.0
Or see this region's nucleotide sequence