Strain Fitness in Variovorax sp. SCN45 around GFF7432

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
43	+				-0.7
43	+				-0.2
51	+				-0.9
51	+				+0.5
51	+				+0.8
51	+				+0.3
51	+				-0.3
51	+				+0.3
51	+				-1.9
51	+				-0.0
51	+				-0.2
51	+				-1.2
51	+				+1.6
51	+				-0.2
51	+				+0.2
51	+				+1.6
51	+				+0.2
51	+				+0.1
51	+				-0.5
51	+				-0.3
51	+				+0.5
51	+				+0.4
51	+				+0.2
51	+				+0.0
51	+				+0.7
51	+				-1.6
51	+				+0.2
51	+				-0.6
89	+				+0.0
89	+				-0.4
89	+				+1.1
89	+				+1.2
89	+				-1.2
89	+				-0.1
89	+				-0.0
90	-				-0.2
90	-				+0.1
90	-				+0.8
90	-				-2.1
371	+		GFF7432	0.64	-0.4
371	+		GFF7432	0.64	-0.6
371	+		GFF7432	0.64	-0.3
371	+		GFF7432	0.64	+0.6
371	+		GFF7432	0.64	-0.2
371	+		GFF7432	0.64	-0.0
371	+		GFF7432	0.64	-0.1
371	+		GFF7432	0.64	-2.4
371	+		GFF7432	0.64	+0.1
372	-		GFF7432	0.64	-0.8
372	-		GFF7432	0.64	+0.2
372	-		GFF7432	0.64	+1.3
372	-		GFF7432	0.64	-0.0
372	-		GFF7432	0.64	+0.4
372	-		GFF7432	0.64	-0.3
372	-		GFF7432	0.64	+1.1
372	-		GFF7432	0.64	+0.7
517	+		GFF7433	0.11	+0.1
517	+		GFF7433	0.11	-0.2
596	+		GFF7433	0.35	+0.5
596	+		GFF7433	0.35	-1.3
596	+		GFF7433	0.35	-0.0
596	+		GFF7433	0.35	+1.1
596	+		GFF7433	0.35	+0.6
596	+		GFF7433	0.35	-1.3
596	+		GFF7433	0.35	-0.1
596	+		GFF7433	0.35	+0.3
596	+		GFF7433	0.35	+0.8
596	+		GFF7433	0.35	-0.5
596	+		GFF7433	0.35	+0.2
596	+		GFF7433	0.35	-0.5
596	+		GFF7433	0.35	+1.2
596	+		GFF7433	0.35	+0.2
596	+		GFF7433	0.35	+0.4
596	+		GFF7433	0.35	-0.3
596	+		GFF7433	0.35	-0.0
596	+		GFF7433	0.35	+1.8
596	+		GFF7433	0.35	+0.1
596	+		GFF7433	0.35	+1.4
597	-		GFF7433	0.35	+0.1
597	-		GFF7433	0.35	+0.4
597	-		GFF7433	0.35	-0.2
597	-		GFF7433	0.35	-0.1
597	-		GFF7433	0.35	+0.8
597	-		GFF7433	0.35	-0.8
597	-		GFF7433	0.35	-0.7
597	-		GFF7433	0.35	+0.2
597	-		GFF7433	0.35	+0.2
597	-		GFF7433	0.35	-0.8
597	-		GFF7433	0.35	-1.9
597	-		GFF7433	0.35	-0.8
597	-		GFF7433	0.35	-0.5
597	-		GFF7433	0.35	+0.2
597	-		GFF7433	0.35	-0.5
935	+				+0.1
935	+				+0.5
935	+				-0.1
935	+				-0.4
935	+				-1.9
935	+				+1.0
935	+				-1.0
935	+				+0.5
935	+				+1.0
936	-				-0.2
936	-				+0.4
936	-				+0.0