Strain Fitness in Variovorax sp. SCN45 around GFF7423

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
2,616	+		GFF7421	0.46	+1.2
2,721	-		GFF7421	0.55	-0.5
2,791	+		GFF7421	0.61	-0.0
2,901	-		GFF7421	0.71	+0.3
2,901	-		GFF7421	0.71	+1.0
2,979	+		GFF7421	0.78	-1.5
2,982	+		GFF7421	0.78	-0.3
3,039	+		GFF7421	0.83	-0.1
3,470	-				-0.5
3,470	-				+0.0
3,470	-				+0.2
3,791	-		GFF7423	0.40	+0.9
4,078	+		GFF7423	0.76	-0.7
4,087	-		GFF7423	0.77	-1.3
4,184	-		GFF7423	0.89	-1.5
4,279	+				+0.4
4,314	-				-0.2
4,314	-				-0.1
4,370	+				-1.1
4,409	+				-0.4
4,692	-				-0.8