Strain Fitness in Variovorax sp. SCN45 around GFF7404

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
209	+				+0.3
210	-				-0.3
274	+				-0.1
431	+		GFF7403	0.65	-0.3
523	-				+0.0
600	-				+0.6
758	-		GFF7404	0.31	+0.1
843	+		GFF7404	0.45	-0.5
844	-		GFF7404	0.45	-0.1
940	+		GFF7404	0.60	-0.1
1,214	+				-1.1
1,326	-				-0.7
1,326	-				-0.1
1,472	-				+1.0
1,597	-		GFF7405	0.21	+0.2
1,677	+		GFF7405	0.29	+0.2
1,815	+		GFF7405	0.42	+1.3
1,816	-		GFF7405	0.42	-0.0
1,816	-		GFF7405	0.42	+0.3
1,816	-		GFF7405	0.42	-0.4
1,932	+		GFF7405	0.53	+0.1
1,933	-		GFF7405	0.54	+0.7
2,032	-		GFF7405	0.63	-0.4
2,094	+		GFF7405	0.69	-0.3
2,094	+		GFF7405	0.69	+1.7