Strain Fitness in Variovorax sp. SCN45 around GFF7401

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
6,315	+		GFF7400	0.65	+0.2
6,406	-		GFF7400	0.69	+0.4
6,406	-		GFF7400	0.69	+0.0
6,635	+		GFF7400	0.80	+0.3
6,647	+		GFF7400	0.81	+0.2
6,647	+		GFF7400	0.81	+2.5
6,648	-		GFF7400	0.81	+0.4
6,916	-				+0.5
6,916	-				-0.3
7,103	-				+0.1
7,105	+				-0.1
7,105	+				-1.0
7,106	-				-2.3
7,250	-		GFF7401	0.14	-0.1
7,262	-		GFF7401	0.14	-0.5
7,353	+		GFF7401	0.21	-0.3
7,353	+		GFF7401	0.21	+0.1
7,354	-		GFF7401	0.21	-0.5
7,354	-		GFF7401	0.21	-1.9
7,456	+		GFF7401	0.28	+1.1
7,456	+		GFF7401	0.28	+0.3
7,457	-		GFF7401	0.28	+0.9
7,457	-		GFF7401	0.28	-0.5
8,072	-		GFF7401	0.71	+0.7
8,179	+		GFF7401	0.79	+0.0
8,183	-		GFF7401	0.79	+0.9
8,712	-		GFF7402	0.30	+0.6
8,763	+		GFF7402	0.40	-0.1
8,864	+		GFF7402	0.59	-0.4