Strain Fitness in Variovorax sp. SCN45 around GFF7298

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
15,683	+				-0.0
15,684	-				-0.4
15,698	+				-0.1
15,698	+				-0.9
15,698	+				+0.5
15,698	+				-0.2
16,261	+				+0.6
16,262	-				-1.3
16,262	-				+0.5
16,366	+				-0.5
17,705	+		GFF7299	0.62	-0.1
17,705	+		GFF7299	0.62	-1.1
17,706	-		GFF7299	0.63	-0.4
17,706	-		GFF7299	0.63	+0.5
17,706	-		GFF7299	0.63	+0.6
17,706	-		GFF7299	0.63	+0.6
17,706	-		GFF7299	0.63	-0.4
17,706	-		GFF7299	0.63	-0.6
17,706	-		GFF7299	0.63	-0.6
17,706	-		GFF7299	0.63	-0.8
17,706	-		GFF7299	0.63	+1.5
17,706	-		GFF7299	0.63	-0.4
17,834	+		GFF7299	0.81	-0.6
17,834	+		GFF7299	0.81	+4.5
17,834	+		GFF7299	0.81	-0.2
17,834	+		GFF7299	0.81	+0.9
17,834	+		GFF7299	0.81	-0.6
17,834	+		GFF7299	0.81	+1.0
17,835	-		GFF7299	0.81	+1.0
17,835	-		GFF7299	0.81	-0.3
17,835	-		GFF7299	0.81	+0.6
17,835	-		GFF7299	0.81	-0.6
17,835	-		GFF7299	0.81	+0.4
17,835	-		GFF7299	0.81	-0.5
17,835	-		GFF7299	0.81	+0.3