Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7125 and GFF7126 are separated by 158 nucleotides GFF7126 and GFF7127 overlap by 25 nucleotides GFF7127 and GFF7128 are separated by 71 nucleotides GFF7128 and GFF7129 are separated by 113 nucleotides GFF7129 and GFF7130 overlap by 4 nucleotides
GFF7125 - no description, at 43,468 to 43,686
GFF7125
GFF7126 - KEGG: transposase, at 43,845 to 44,285
GFF7126
GFF7127 - Mobile element protein, at 44,261 to 44,611
GFF7127
GFF7128 - Mobile element protein, at 44,683 to 45,138
GFF7128
GFF7129 - Mobile element protein, at 45,252 to 46,085
GFF7129
GFF7130 - Mobile element protein, at 46,082 to 46,387
GFF7130
Position (kb) 44
45
46 Strain fitness (log2 ratio) -1
0
1
2 at 43.761 kb on + strand at 43.762 kb on - strand at 43.762 kb on - strand at 43.812 kb on + strand at 43.812 kb on + strand at 43.812 kb on + strand at 43.813 kb on - strand at 43.813 kb on - strand at 43.813 kb on - strand at 43.824 kb on + strand at 43.824 kb on + strand at 43.825 kb on - strand at 43.825 kb on - strand at 43.842 kb on + strand at 43.843 kb on - strand at 43.914 kb on + strand, within GFF7126 at 43.915 kb on - strand, within GFF7126 at 43.915 kb on - strand, within GFF7126 at 43.915 kb on - strand, within GFF7126 at 43.915 kb on - strand, within GFF7126 at 44.054 kb on + strand, within GFF7126 at 44.291 kb on + strand at 44.291 kb on + strand at 44.390 kb on + strand, within GFF7127 at 44.390 kb on + strand, within GFF7127 at 44.391 kb on - strand, within GFF7127 at 44.391 kb on - strand, within GFF7127 at 44.391 kb on - strand, within GFF7127 at 44.391 kb on - strand, within GFF7127 at 44.391 kb on - strand, within GFF7127 at 44.391 kb on - strand, within GFF7127 at 44.391 kb on - strand, within GFF7127 at 44.680 kb on - strand at 44.680 kb on - strand at 44.680 kb on - strand at 44.680 kb on - strand at 45.234 kb on + strand at 45.235 kb on - strand at 45.253 kb on + strand at 45.292 kb on + strand at 45.292 kb on + strand at 45.293 kb on - strand at 45.347 kb on - strand, within GFF7129 at 45.358 kb on + strand, within GFF7129 at 45.359 kb on - strand, within GFF7129 at 45.409 kb on + strand, within GFF7129 at 45.410 kb on - strand, within GFF7129 at 45.410 kb on - strand, within GFF7129 at 45.421 kb on + strand, within GFF7129 at 45.691 kb on + strand, within GFF7129 at 45.691 kb on + strand, within GFF7129 at 45.692 kb on - strand, within GFF7129 at 45.692 kb on - strand, within GFF7129 at 45.692 kb on - strand, within GFF7129 at 45.718 kb on + strand, within GFF7129 at 45.718 kb on + strand, within GFF7129 at 45.718 kb on + strand, within GFF7129 at 45.719 kb on - strand, within GFF7129 at 45.719 kb on - strand, within GFF7129 at 45.719 kb on - strand, within GFF7129 at 45.719 kb on - strand, within GFF7129 at 45.778 kb on + strand, within GFF7129 at 45.784 kb on + strand, within GFF7129 at 45.785 kb on - strand, within GFF7129 at 45.785 kb on - strand, within GFF7129 at 45.785 kb on - strand, within GFF7129 at 45.785 kb on - strand, within GFF7129 at 45.830 kb on - strand, within GFF7129 at 46.009 kb on + strand at 46.012 kb on + strand at 46.012 kb on + strand at 46.013 kb on - strand at 46.013 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 43,761 + +0.5 43,762 - +0.6 43,762 - +0.2 43,812 + -1.0 43,812 + -0.6 43,812 + -0.6 43,813 - +0.1 43,813 - +0.2 43,813 - -0.4 43,824 + +0.1 43,824 + -0.1 43,825 - -0.4 43,825 - -0.3 43,842 + +0.2 43,843 - -0.1 43,914 + GFF7126 0.16 -0.1 43,915 - GFF7126 0.16 -0.2 43,915 - GFF7126 0.16 +0.0 43,915 - GFF7126 0.16 +0.3 43,915 - GFF7126 0.16 -0.6 44,054 + GFF7126 0.47 -0.1 44,291 + -0.9 44,291 + -0.3 44,390 + GFF7127 0.37 +0.9 44,390 + GFF7127 0.37 +0.2 44,391 - GFF7127 0.37 -0.8 44,391 - GFF7127 0.37 -0.4 44,391 - GFF7127 0.37 -0.0 44,391 - GFF7127 0.37 -0.0 44,391 - GFF7127 0.37 +1.2 44,391 - GFF7127 0.37 +0.3 44,391 - GFF7127 0.37 +1.0 44,680 - -1.4 44,680 - -0.2 44,680 - -0.4 44,680 - +0.4 45,234 + -0.1 45,235 - +0.5 45,253 + -0.4 45,292 + -0.3 45,292 + -0.1 45,293 - -0.6 45,347 - GFF7129 0.11 -0.2 45,358 + GFF7129 0.13 -0.8 45,359 - GFF7129 0.13 +0.1 45,409 + GFF7129 0.19 -0.5 45,410 - GFF7129 0.19 +0.1 45,410 - GFF7129 0.19 -0.9 45,421 + GFF7129 0.20 +0.6 45,691 + GFF7129 0.53 -0.2 45,691 + GFF7129 0.53 +0.3 45,692 - GFF7129 0.53 +1.2 45,692 - GFF7129 0.53 -0.4 45,692 - GFF7129 0.53 -0.7 45,718 + GFF7129 0.56 +2.5 45,718 + GFF7129 0.56 +1.1 45,718 + GFF7129 0.56 +0.2 45,719 - GFF7129 0.56 -0.5 45,719 - GFF7129 0.56 -0.4 45,719 - GFF7129 0.56 +0.0 45,719 - GFF7129 0.56 -0.5 45,778 + GFF7129 0.63 +0.5 45,784 + GFF7129 0.64 -0.6 45,785 - GFF7129 0.64 -0.0 45,785 - GFF7129 0.64 -0.4 45,785 - GFF7129 0.64 -1.2 45,785 - GFF7129 0.64 -0.2 45,830 - GFF7129 0.69 -0.5 46,009 + -1.4 46,012 + +0.1 46,012 + +1.4 46,013 - +0.2 46,013 - -0.5
Or see this region's nucleotide sequence