Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7107 and GFF7108 are separated by 101 nucleotides GFF7108 and GFF7109 are separated by 592 nucleotides
GFF7107 - 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases, at 24,230 to 25,900
GFF7107
GFF7108 - Transcriptional regulator, LysR family, at 26,002 to 26,907
GFF7108
GFF7109 - BUG/TctC family periplasmic protein, at 27,500 to 28,471
GFF7109
Position (kb) 26
27 Strain fitness (log2 ratio) -1
0
1
2
3 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.143 kb on + strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.144 kb on - strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.182 kb on + strand, within GFF7107 at 25.183 kb on - strand, within GFF7107 at 25.183 kb on - strand, within GFF7107 at 25.292 kb on + strand, within GFF7107 at 25.292 kb on + strand, within GFF7107 at 25.293 kb on - strand, within GFF7107 at 25.293 kb on - strand, within GFF7107 at 25.368 kb on + strand, within GFF7107 at 25.524 kb on + strand, within GFF7107 at 25.524 kb on + strand, within GFF7107 at 25.524 kb on + strand, within GFF7107 at 25.524 kb on + strand, within GFF7107 at 25.525 kb on - strand, within GFF7107 at 25.525 kb on - strand, within GFF7107 at 25.525 kb on - strand, within GFF7107 at 25.593 kb on + strand, within GFF7107 at 25.593 kb on + strand, within GFF7107 at 25.593 kb on + strand, within GFF7107 at 25.593 kb on + strand, within GFF7107 at 25.594 kb on - strand, within GFF7107 at 25.651 kb on + strand, within GFF7107 at 25.675 kb on - strand, within GFF7107 at 25.808 kb on + strand at 25.808 kb on + strand at 25.808 kb on + strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.809 kb on - strand at 25.956 kb on + strand at 25.956 kb on + strand at 25.957 kb on - strand at 25.957 kb on - strand at 25.957 kb on - strand at 25.957 kb on - strand at 25.984 kb on + strand at 25.986 kb on + strand at 25.997 kb on + strand at 26.050 kb on + strand at 26.050 kb on + strand at 26.929 kb on + strand at 26.930 kb on - strand at 26.930 kb on - strand at 26.930 kb on - strand at 26.930 kb on - strand at 26.930 kb on - strand at 26.968 kb on + strand at 26.968 kb on + strand at 26.968 kb on + strand at 26.968 kb on + strand at 26.969 kb on - strand at 26.969 kb on - strand at 26.969 kb on - strand at 26.973 kb on + strand at 26.974 kb on - strand at 26.974 kb on - strand at 27.154 kb on + strand at 27.154 kb on + strand at 27.154 kb on + strand at 27.154 kb on + strand at 27.154 kb on + strand at 27.154 kb on + strand at 27.155 kb on - strand at 27.155 kb on - strand at 27.157 kb on + strand at 27.157 kb on + strand at 27.157 kb on + strand at 27.157 kb on + strand at 27.157 kb on + strand at 27.158 kb on - strand at 27.158 kb on - strand at 27.158 kb on - strand at 27.158 kb on - strand at 27.158 kb on - strand at 27.210 kb on + strand at 27.283 kb on + strand at 27.283 kb on + strand at 27.283 kb on + strand at 27.284 kb on - strand at 27.284 kb on - strand at 27.313 kb on - strand at 27.313 kb on - strand at 27.365 kb on - strand at 27.391 kb on + strand at 27.391 kb on + strand at 27.392 kb on - strand at 27.392 kb on - strand at 27.392 kb on - strand at 27.392 kb on - strand at 27.392 kb on - strand at 27.392 kb on - strand at 27.405 kb on + strand at 27.405 kb on + strand at 27.405 kb on + strand at 27.405 kb on + strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.406 kb on - strand at 27.408 kb on - strand at 27.408 kb on - strand at 27.480 kb on + strand at 27.480 kb on + strand at 27.480 kb on + strand at 27.481 kb on - strand at 27.481 kb on - strand at 27.481 kb on - strand at 27.481 kb on - strand at 27.481 kb on - strand at 27.481 kb on - strand at 27.481 kb on - strand at 27.481 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 25,143 + GFF7107 0.55 +0.3 25,143 + GFF7107 0.55 +0.1 25,143 + GFF7107 0.55 -1.4 25,143 + GFF7107 0.55 -0.1 25,143 + GFF7107 0.55 -1.0 25,143 + GFF7107 0.55 -0.4 25,144 - GFF7107 0.55 -0.1 25,144 - GFF7107 0.55 +0.2 25,144 - GFF7107 0.55 -0.5 25,144 - GFF7107 0.55 +1.3 25,144 - GFF7107 0.55 -0.1 25,182 + GFF7107 0.57 -0.7 25,182 + GFF7107 0.57 +0.4 25,182 + GFF7107 0.57 +0.5 25,182 + GFF7107 0.57 +0.3 25,182 + GFF7107 0.57 +0.3 25,183 - GFF7107 0.57 -0.8 25,183 - GFF7107 0.57 -0.7 25,292 + GFF7107 0.64 +0.9 25,292 + GFF7107 0.64 +0.4 25,293 - GFF7107 0.64 +0.4 25,293 - GFF7107 0.64 -0.6 25,368 + GFF7107 0.68 +0.7 25,524 + GFF7107 0.77 +0.1 25,524 + GFF7107 0.77 +0.4 25,524 + GFF7107 0.77 +0.2 25,524 + GFF7107 0.77 +1.1 25,525 - GFF7107 0.77 +0.1 25,525 - GFF7107 0.77 +0.7 25,525 - GFF7107 0.77 +1.0 25,593 + GFF7107 0.82 -0.1 25,593 + GFF7107 0.82 -0.4 25,593 + GFF7107 0.82 -0.2 25,593 + GFF7107 0.82 +0.0 25,594 - GFF7107 0.82 -0.3 25,651 + GFF7107 0.85 -0.6 25,675 - GFF7107 0.86 -1.6 25,808 + +0.1 25,808 + +0.9 25,808 + +0.4 25,809 - +0.0 25,809 - -0.6 25,809 - -0.3 25,809 - +0.2 25,809 - -0.2 25,809 - -0.4 25,956 + +1.4 25,956 + -1.3 25,957 - -0.2 25,957 - +0.4 25,957 - -0.3 25,957 - +0.1 25,984 + +0.1 25,986 + -0.8 25,997 + -0.2 26,050 + -0.7 26,050 + -0.2 26,929 + -0.8 26,930 - +0.4 26,930 - +0.2 26,930 - -0.4 26,930 - +0.2 26,930 - -0.1 26,968 + -0.2 26,968 + +0.4 26,968 + -0.0 26,968 + -0.5 26,969 - +0.1 26,969 - +1.0 26,969 - +1.0 26,973 + +0.6 26,974 - -0.0 26,974 - +0.1 27,154 + -0.2 27,154 + +0.0 27,154 + +0.5 27,154 + -0.1 27,154 + -0.2 27,154 + +0.2 27,155 - +0.4 27,155 - -0.7 27,157 + -0.4 27,157 + +0.2 27,157 + -0.1 27,157 + -0.0 27,157 + -0.9 27,158 - +0.3 27,158 - +0.5 27,158 - -0.2 27,158 - -0.4 27,158 - +0.4 27,210 + -0.2 27,283 + +0.8 27,283 + +0.1 27,283 + -1.2 27,284 - +0.2 27,284 - +0.3 27,313 - -1.3 27,313 - +0.8 27,365 - +0.5 27,391 + -0.7 27,391 + -0.3 27,392 - +0.2 27,392 - -1.6 27,392 - +0.4 27,392 - -0.2 27,392 - +0.2 27,392 - -0.2 27,405 + +2.8 27,405 + -0.2 27,405 + -1.6 27,405 + -0.5 27,406 - +0.4 27,406 - +1.2 27,406 - -0.6 27,406 - -0.8 27,406 - +0.9 27,406 - -0.1 27,406 - -1.0 27,406 - -0.6 27,406 - -1.4 27,406 - +1.2 27,406 - +0.1 27,406 - -1.6 27,408 - +0.1 27,408 - +0.2 27,480 + -0.0 27,480 + -0.6 27,480 + -0.0 27,481 - -0.6 27,481 - -0.2 27,481 - -0.2 27,481 - -0.1 27,481 - +0.0 27,481 - +0.2 27,481 - +1.0 27,481 - +0.8
Or see this region's nucleotide sequence