Strain Fitness in Variovorax sp. SCN45 around GFF7015

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
30,422	+		GFF7014	0.58	-0.3
30,426	-		GFF7014	0.58	+0.5
30,426	-		GFF7014	0.58	+0.7
30,426	-		GFF7014	0.58	+0.6
30,870	-		GFF7014	0.87	-1.2
30,870	-		GFF7014	0.87	-0.7
31,175	+				+0.6
31,175	+				+0.6
31,628	+				-0.7
31,629	-				-0.8
31,629	-				-0.5
31,629	-				+0.6
31,794	+				-0.9
31,836	+		GFF7016	0.11	-1.4
31,836	+		GFF7016	0.11	-1.0
32,208	+		GFF7016	0.36	+0.1
32,209	-		GFF7016	0.36	+0.8
32,355	+		GFF7016	0.46	-0.9
32,356	-		GFF7016	0.46	-0.1