Strain Fitness in Variovorax sp. SCN45 around GFF6979

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
50,109	+		GFF6977	0.83	-0.6
50,109	+		GFF6977	0.83	-0.6
50,117	+		GFF6977	0.85	-1.4
50,118	-		GFF6977	0.85	-0.4
50,118	-		GFF6977	0.85	+0.1
50,428	+		GFF6978	0.30	-1.1
50,716	+		GFF6978	0.72	+0.7
50,717	-		GFF6978	0.72	-0.2
50,749	+		GFF6978	0.76	+0.1
50,752	+		GFF6978	0.77	-0.3
50,753	-		GFF6978	0.77	+0.6
50,833	+		GFF6978	0.88	-0.5
50,833	+		GFF6978	0.88	+0.7
50,833	+		GFF6978	0.88	-1.4
50,834	-		GFF6978	0.88	+1.2
50,834	-		GFF6978	0.88	-1.2
50,834	-		GFF6978	0.88	+1.9
50,834	-		GFF6978	0.88	-1.0
50,887	+				-0.1
50,887	+				+0.3
51,005	+				-0.7
51,005	+				-0.5
51,006	-				-0.1
51,006	-				+0.7
51,522	-				+0.1
51,617	-				-0.2
51,617	-				+0.2
51,688	+				+0.2
51,691	+				+0.6
52,088	-				+0.7
52,167	+				+0.9
52,168	-				+0.1
52,180	-				-0.2
52,205	+				-1.0
52,206	-				+0.2