Strain Fitness in Variovorax sp. SCN45 around GFF6975

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
46,734	-		GFF6972	0.24	-0.9
46,749	+		GFF6972	0.37	-0.2
46,897	+				-0.4
46,897	+				-0.5
46,898	-				-0.1
46,932	+				+0.0
46,933	-				+0.4
46,933	-				-0.7
46,950	-				+0.7
46,950	-				-2.0
46,950	-				+2.0
46,950	-				-0.9
46,963	+				-0.8
46,963	+				-0.0
46,963	+				-0.4
46,963	+				-0.6
46,963	+				-0.8
46,963	+				-1.1
46,964	-				-0.6
46,964	-				-2.0
46,964	-				+0.8
46,989	+				+0.3
47,074	+		GFF6973	0.35	-0.3
47,075	+		GFF6973	0.35	-0.0
47,075	+		GFF6973	0.35	-0.7
47,075	+		GFF6973	0.35	-0.5
47,076	-		GFF6973	0.35	+0.1
47,076	-		GFF6973	0.35	+0.1
47,076	-		GFF6973	0.35	+1.3
47,080	+		GFF6973	0.36	+0.3
47,080	+		GFF6973	0.36	+0.0
47,173	-		GFF6973	0.65	+0.0
47,238	+		GFF6973	0.85	+0.0
47,238	+		GFF6973	0.85	-0.7
47,238	+		GFF6973	0.85	+1.0
47,291	-				-0.3
47,291	-				-0.3
47,291	-				-0.5
47,358	+				+0.2
47,358	+				-1.3
47,358	+				+0.3
47,358	+				+0.3
47,359	-				-0.0
47,359	-				-1.7
47,359	-				-1.3
47,359	-				-0.7
47,630	+		GFF6974	0.72	+0.3
47,631	-		GFF6974	0.72	-0.6
47,939	-		GFF6975	0.49	+0.3
48,283	-				-0.4
48,510	-				-0.2
48,510	-				+0.2
48,617	+				+0.1
48,617	+				+1.6
48,618	-				-0.2
48,767	+				-0.0
48,768	-				+1.6
49,080	+		GFF6976	0.22	-0.3
49,080	+		GFF6976	0.22	+0.5
49,080	+		GFF6976	0.22	-0.5
49,081	-		GFF6976	0.22	-0.4
49,081	-		GFF6976	0.22	+0.2
49,081	-		GFF6976	0.22	-0.2