Strain Fitness in Variovorax sp. SCN45 around GFF6967

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
40,501	+		GFF6966	0.80	-2.6
40,501	+		GFF6966	0.80	+0.5
40,501	+		GFF6966	0.80	+0.3
40,501	+		GFF6966	0.80	+0.6
40,501	+		GFF6966	0.80	-1.6
40,502	-		GFF6966	0.81	-0.1
41,195	-		GFF6967	0.31	-0.2
41,466	-				-0.0
41,522	+				+0.0
41,522	+				+0.0
41,522	+				-0.2
41,523	-				-0.3
41,635	-				-0.2
41,635	-				-0.4
41,766	+				-0.6
41,771	+				-0.7
41,851	+				-1.6
41,998	-				-1.4
42,045	-				+1.0
42,045	-				-0.9
42,119	+				-0.9
42,136	-				-0.2
42,136	-				+0.1
42,282	-				+0.8
42,314	+				-0.5
42,419	+				-0.4
42,450	+				+2.2
42,451	-				+1.3
42,462	+				-0.4
42,462	+				-0.7
42,464	+				-0.3