Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6918 and GFF6919 are separated by 151 nucleotides
GFF6918 - Transcriptional regulator, AraC family, at 55,147 to 56,130
GFF6918
GFF6919 - NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2), at 56,282 to 56,344
GFF6919
Position (kb) 56
57 Strain fitness (log2 ratio) -2
-1
0
1
2 at 55.288 kb on + strand, within GFF6918 at 55.288 kb on + strand, within GFF6918 at 55.288 kb on + strand, within GFF6918 at 55.289 kb on - strand, within GFF6918 at 55.384 kb on + strand, within GFF6918 at 55.384 kb on + strand, within GFF6918 at 55.384 kb on + strand, within GFF6918 at 55.384 kb on + strand, within GFF6918 at 55.385 kb on - strand, within GFF6918 at 55.385 kb on - strand, within GFF6918 at 55.385 kb on - strand, within GFF6918 at 55.385 kb on - strand, within GFF6918 at 55.471 kb on + strand, within GFF6918 at 55.472 kb on - strand, within GFF6918 at 55.472 kb on - strand, within GFF6918 at 55.615 kb on + strand, within GFF6918 at 55.615 kb on + strand, within GFF6918 at 55.616 kb on - strand, within GFF6918 at 55.874 kb on - strand, within GFF6918 at 55.874 kb on - strand, within GFF6918 at 56.128 kb on + strand at 56.128 kb on + strand at 56.128 kb on + strand at 56.128 kb on + strand at 56.129 kb on - strand at 56.129 kb on - strand at 56.129 kb on - strand at 56.129 kb on - strand at 56.129 kb on - strand at 56.159 kb on + strand at 56.159 kb on + strand at 56.161 kb on + strand at 56.161 kb on + strand at 56.162 kb on - strand at 56.162 kb on - strand at 56.162 kb on - strand at 56.162 kb on - strand at 56.162 kb on - strand at 56.207 kb on - strand at 56.207 kb on - strand at 56.239 kb on + strand at 56.239 kb on + strand at 56.239 kb on + strand at 56.239 kb on + strand at 56.239 kb on + strand at 56.240 kb on - strand at 56.240 kb on - strand at 56.240 kb on - strand at 56.240 kb on - strand at 56.240 kb on - strand at 56.240 kb on - strand at 56.240 kb on - strand at 56.282 kb on - strand at 56.282 kb on - strand at 56.290 kb on - strand, within GFF6919 at 56.290 kb on - strand, within GFF6919
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 55,288 + GFF6918 0.14 -1.5 55,288 + GFF6918 0.14 -0.1 55,288 + GFF6918 0.14 -0.3 55,289 - GFF6918 0.14 -0.9 55,384 + GFF6918 0.24 -0.3 55,384 + GFF6918 0.24 +1.0 55,384 + GFF6918 0.24 +0.3 55,384 + GFF6918 0.24 +0.0 55,385 - GFF6918 0.24 -0.4 55,385 - GFF6918 0.24 -0.5 55,385 - GFF6918 0.24 +0.4 55,385 - GFF6918 0.24 -0.0 55,471 + GFF6918 0.33 -0.2 55,472 - GFF6918 0.33 +0.1 55,472 - GFF6918 0.33 -0.7 55,615 + GFF6918 0.48 -1.4 55,615 + GFF6918 0.48 -0.2 55,616 - GFF6918 0.48 -0.1 55,874 - GFF6918 0.74 -0.5 55,874 - GFF6918 0.74 +0.7 56,128 + -1.2 56,128 + +0.5 56,128 + -0.5 56,128 + +0.5 56,129 - -0.5 56,129 - +0.7 56,129 - +0.1 56,129 - -0.2 56,129 - -0.1 56,159 + +1.2 56,159 + -0.4 56,161 + +0.1 56,161 + +0.7 56,162 - +1.1 56,162 - -0.7 56,162 - -0.6 56,162 - -0.9 56,162 - +0.7 56,207 - -0.9 56,207 - -0.0 56,239 + +0.8 56,239 + +0.4 56,239 + -0.2 56,239 + -0.2 56,239 + -0.6 56,240 - -0.6 56,240 - -2.0 56,240 - -0.3 56,240 - +0.7 56,240 - -1.0 56,240 - -0.7 56,240 - +0.4 56,282 - -0.9 56,282 - -0.5 56,290 - GFF6919 0.13 +0.1 56,290 - GFF6919 0.13 +2.1
Or see this region's nucleotide sequence