Strain Fitness in Variovorax sp. SCN45 around GFF6785

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
34,481	+		GFF6784	0.36	-0.0
34,527	+		GFF6784	0.39	-0.6
34,527	+		GFF6784	0.39	-0.2
34,607	+		GFF6784	0.46	+0.5
34,607	+		GFF6784	0.46	-0.9
34,608	-		GFF6784	0.46	-0.1
34,662	-		GFF6784	0.50	+0.1
35,310	-				+0.8
35,643	+				-1.1
35,643	+				-0.1
35,643	+				+0.2
35,644	-				-1.2
35,644	-				-1.4
35,720	+		GFF6786	0.13	+2.0
35,721	-		GFF6786	0.13	+1.4
35,741	+		GFF6786	0.17	-1.8
35,742	-		GFF6786	0.17	-1.4
35,865	-		GFF6786	0.44	-0.6
36,198	+		GFF6787	0.12	+1.1
36,198	+		GFF6787	0.12	+0.2
36,439	-		GFF6787	0.58	+0.6