Strain Fitness in Variovorax sp. SCN45 around GFF6702

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
10,066	+				+1.0
10,066	+				-0.0
10,067	-				+0.5
10,067	-				+0.0
10,123	+		GFF6701	0.15	+1.2
10,351	+		GFF6701	0.38	+0.6
10,352	-		GFF6701	0.38	-0.3
10,352	-		GFF6701	0.38	-1.9
10,955	+				+2.6
10,956	-				-1.4
11,004	+				+0.0
11,004	+				+0.2
12,268	-				+0.2
12,268	-				+0.3
12,268	-				-0.2
12,268	-				-0.4
13,022	+		GFF6704	0.40	-0.6
13,023	-		GFF6704	0.40	-0.2
13,023	-		GFF6704	0.40	+0.6
13,120	+		GFF6704	0.85	+0.7
13,120	+		GFF6704	0.85	-0.1