Strain Fitness in Variovorax sp. SCN45 around GFF6466

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
43,009	+		GFF6465	0.23	-0.4
43,009	+		GFF6465	0.23	-0.8
43,009	+		GFF6465	0.23	-0.9
43,723	+		GFF6465	0.89	-0.3
43,724	-		GFF6465	0.89	+2.2
43,851	+				-1.6
43,852	-				+0.4
43,860	+				-0.2
44,018	-		GFF6466	0.64	-0.0
44,168	+				+0.2
44,168	+				-1.8
44,637	-		GFF6467	0.43	+0.6
44,670	-		GFF6467	0.46	+0.0
44,670	-		GFF6467	0.46	-0.7
44,670	-		GFF6467	0.46	+0.0