Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF639 and GFF640 are separated by 7 nucleotides GFF640 and GFF641 are separated by 112 nucleotides GFF641 and GFF642 are separated by 173 nucleotides
GFF639 - hypothetical protein, at 691,162 to 691,932
GFF639
GFF640 - no description, at 691,940 to 692,419
GFF640
GFF641 - no description, at 692,532 to 693,050
GFF641
GFF642 - Membrane protease family protein BA0301, at 693,224 to 694,120
GFF642
Position (kb) 692
693
694 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 691.615 kb on + strand, within GFF639 at 691.615 kb on + strand, within GFF639 at 691.615 kb on + strand, within GFF639 at 691.615 kb on + strand, within GFF639 at 691.615 kb on + strand, within GFF639 at 691.615 kb on + strand, within GFF639 at 691.616 kb on - strand, within GFF639 at 691.616 kb on - strand, within GFF639 at 691.616 kb on - strand, within GFF639 at 691.616 kb on - strand, within GFF639 at 691.636 kb on + strand, within GFF639 at 691.636 kb on + strand, within GFF639 at 691.636 kb on + strand, within GFF639 at 691.637 kb on - strand, within GFF639 at 691.637 kb on - strand, within GFF639 at 691.735 kb on + strand, within GFF639 at 691.735 kb on + strand, within GFF639 at 691.736 kb on - strand, within GFF639 at 691.736 kb on - strand, within GFF639 at 691.736 kb on - strand, within GFF639 at 691.736 kb on - strand, within GFF639 at 691.786 kb on + strand, within GFF639 at 691.897 kb on + strand at 691.898 kb on - strand at 691.898 kb on - strand at 691.900 kb on + strand at 691.900 kb on + strand at 692.005 kb on - strand, within GFF640 at 692.005 kb on - strand, within GFF640 at 692.221 kb on - strand, within GFF640 at 692.221 kb on - strand, within GFF640 at 692.518 kb on - strand at 692.518 kb on - strand at 692.534 kb on - strand at 692.860 kb on + strand, within GFF641 at 693.043 kb on - strand at 693.043 kb on - strand at 693.043 kb on - strand at 693.099 kb on - strand at 693.099 kb on - strand at 693.275 kb on + strand at 693.275 kb on + strand at 693.276 kb on - strand at 693.294 kb on - strand at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.722 kb on + strand, within GFF642 at 693.723 kb on - strand, within GFF642 at 693.723 kb on - strand, within GFF642 at 693.723 kb on - strand, within GFF642 at 693.723 kb on - strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 691,615 + GFF639 0.59 +0.2 691,615 + GFF639 0.59 +1.2 691,615 + GFF639 0.59 -0.0 691,615 + GFF639 0.59 +0.1 691,615 + GFF639 0.59 -0.8 691,615 + GFF639 0.59 +2.4 691,616 - GFF639 0.59 +0.7 691,616 - GFF639 0.59 +0.2 691,616 - GFF639 0.59 -0.4 691,616 - GFF639 0.59 -0.3 691,636 + GFF639 0.61 +0.0 691,636 + GFF639 0.61 -0.7 691,636 + GFF639 0.61 +1.7 691,637 - GFF639 0.62 +0.3 691,637 - GFF639 0.62 -1.0 691,735 + GFF639 0.74 +0.4 691,735 + GFF639 0.74 -0.8 691,736 - GFF639 0.74 +0.3 691,736 - GFF639 0.74 -0.0 691,736 - GFF639 0.74 +0.3 691,736 - GFF639 0.74 -0.8 691,786 + GFF639 0.81 +0.9 691,897 + +0.1 691,898 - -0.1 691,898 - +0.1 691,900 + +1.9 691,900 + -1.9 692,005 - GFF640 0.14 -0.2 692,005 - GFF640 0.14 +0.8 692,221 - GFF640 0.59 +0.5 692,221 - GFF640 0.59 +0.2 692,518 - +1.2 692,518 - -0.3 692,534 - +0.7 692,860 + GFF641 0.63 +0.9 693,043 - -0.6 693,043 - -0.4 693,043 - -0.3 693,099 - -0.8 693,099 - -0.3 693,275 + +0.1 693,275 + -0.3 693,276 - +0.1 693,294 - -0.1 693,419 + GFF642 0.22 +0.1 693,419 + GFF642 0.22 -0.1 693,419 + GFF642 0.22 +0.3 693,419 + GFF642 0.22 -0.2 693,419 + GFF642 0.22 -1.1 693,419 + GFF642 0.22 +0.5 693,420 - GFF642 0.22 +1.2 693,420 - GFF642 0.22 -0.2 693,420 - GFF642 0.22 -1.0 693,420 - GFF642 0.22 +0.6 693,420 - GFF642 0.22 -0.8 693,420 - GFF642 0.22 +0.1 693,665 + GFF642 0.49 -0.5 693,665 + GFF642 0.49 +0.1 693,665 + GFF642 0.49 +0.5 693,665 + GFF642 0.49 +0.2 693,665 + GFF642 0.49 -0.4 693,666 - GFF642 0.49 +0.1 693,666 - GFF642 0.49 +0.2 693,666 - GFF642 0.49 -0.8 693,666 - GFF642 0.49 -0.4 693,666 - GFF642 0.49 +0.1 693,666 - GFF642 0.49 +2.9 693,722 + GFF642 0.56 +0.2 693,723 - GFF642 0.56 -0.6 693,723 - GFF642 0.56 -0.1 693,723 - GFF642 0.56 -0.8 693,723 - GFF642 0.56 -0.2 693,870 + GFF642 0.72 +0.0 693,870 + GFF642 0.72 -0.8 693,870 + GFF642 0.72 -0.3 693,870 + GFF642 0.72 -0.3 693,870 + GFF642 0.72 -1.2 693,870 + GFF642 0.72 -0.6 693,870 + GFF642 0.72 -0.7 693,870 + GFF642 0.72 +0.6 693,870 + GFF642 0.72 -1.0 693,871 - GFF642 0.72 -0.3 693,871 - GFF642 0.72 +0.1 693,871 - GFF642 0.72 +0.1 693,871 - GFF642 0.72 -0.1 693,871 - GFF642 0.72 -0.4 693,871 - GFF642 0.72 -0.8 693,875 + GFF642 0.73 +0.2 693,875 + GFF642 0.73 -0.8 693,875 + GFF642 0.73 -0.5 693,875 + GFF642 0.73 -0.2 693,875 + GFF642 0.73 -0.2 693,876 - GFF642 0.73 -1.3 693,876 - GFF642 0.73 +0.4 693,876 - GFF642 0.73 -0.2 693,876 - GFF642 0.73 -1.5 693,876 - GFF642 0.73 +0.4 693,876 - GFF642 0.73 +1.5
Or see this region's nucleotide sequence