Strain Fitness in Variovorax sp. SCN45 around GFF6257

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
50,451	-		GFF6256	0.65	-0.1
50,451	-		GFF6256	0.65	-0.1
50,514	+		GFF6256	0.74	+0.5
50,515	-		GFF6256	0.74	+1.1
50,523	+		GFF6256	0.75	-1.5
50,523	+		GFF6256	0.75	-0.5
50,523	+		GFF6256	0.75	+0.4
50,625	-		GFF6256	0.90	-0.0
50,732	+				+0.7
50,732	+				+0.3
50,732	+				-0.4
50,733	-				-0.6
51,426	-				-0.2
51,697	+		GFF6258	0.25	-0.3
51,698	-		GFF6258	0.25	+0.3
51,713	-		GFF6258	0.27	+0.4
51,713	-		GFF6258	0.27	-0.5
51,713	-		GFF6258	0.27	-0.1
51,713	-		GFF6258	0.27	-1.0
51,841	+		GFF6258	0.41	-0.6
51,841	+		GFF6258	0.41	-0.2
51,841	+		GFF6258	0.41	-1.6
51,841	+		GFF6258	0.41	-1.1
51,841	+		GFF6258	0.41	+0.0
51,841	+		GFF6258	0.41	-0.9
51,842	-		GFF6258	0.41	-0.1
51,842	-		GFF6258	0.41	-1.0
51,880	+		GFF6258	0.46	-0.3
51,986	-		GFF6258	0.58	+3.0
52,322	-				-0.2
52,322	-				+2.1
52,333	+				+0.4
52,333	+				-0.3
52,333	+				+0.8
52,334	-				+0.5
52,419	+				-1.9
52,419	+				+0.3
52,419	+				+0.3
52,419	+				-0.1
52,419	+				+0.7
52,419	+				-0.2
52,419	+				-0.3
52,419	+				-1.1