Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6153 and GFF6154 are separated by 183 nucleotides GFF6154 and GFF6155 are separated by 10 nucleotides
GFF6153 - Transcriptional activator of acetoin/glycerol metabolism, at 57,884 to 59,026
GFF6153
GFF6154 - Aerobic carbon monoxide dehydrogenase (quinone), small chain (EC 1.2.5.3), at 59,210 to 59,707
GFF6154
GFF6155 - Aerobic carbon monoxide dehydrogenase (quinone), large chain (EC 1.2.5.3), at 59,718 to 62,108
GFF6155
Position (kb) 59
60 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 58.269 kb on + strand, within GFF6153 at 58.269 kb on + strand, within GFF6153 at 58.269 kb on + strand, within GFF6153 at 58.269 kb on + strand, within GFF6153 at 58.269 kb on + strand, within GFF6153 at 58.270 kb on - strand, within GFF6153 at 58.270 kb on - strand, within GFF6153 at 58.509 kb on + strand, within GFF6153 at 58.509 kb on + strand, within GFF6153 at 58.509 kb on + strand, within GFF6153 at 58.510 kb on - strand, within GFF6153 at 58.510 kb on - strand, within GFF6153 at 58.510 kb on - strand, within GFF6153 at 58.510 kb on - strand, within GFF6153 at 58.648 kb on - strand, within GFF6153 at 58.648 kb on - strand, within GFF6153 at 59.134 kb on + strand at 59.135 kb on - strand at 59.139 kb on + strand at 59.140 kb on - strand at 59.140 kb on - strand at 59.781 kb on + strand at 59.781 kb on + strand at 59.808 kb on + strand at 59.808 kb on + strand at 59.808 kb on + strand at 59.809 kb on - strand at 59.809 kb on - strand at 60.057 kb on + strand, within GFF6155 at 60.058 kb on - strand, within GFF6155 at 60.058 kb on - strand, within GFF6155 at 60.058 kb on - strand, within GFF6155 at 60.138 kb on + strand, within GFF6155 at 60.231 kb on + strand, within GFF6155 at 60.231 kb on + strand, within GFF6155 at 60.231 kb on + strand, within GFF6155 at 60.231 kb on + strand, within GFF6155 at 60.231 kb on + strand, within GFF6155 at 60.231 kb on + strand, within GFF6155 at 60.232 kb on - strand, within GFF6155 at 60.232 kb on - strand, within GFF6155 at 60.232 kb on - strand, within GFF6155 at 60.363 kb on + strand, within GFF6155 at 60.364 kb on - strand, within GFF6155 at 60.364 kb on - strand, within GFF6155 at 60.384 kb on + strand, within GFF6155 at 60.384 kb on + strand, within GFF6155 at 60.385 kb on - strand, within GFF6155 at 60.393 kb on + strand, within GFF6155 at 60.393 kb on + strand, within GFF6155 at 60.393 kb on + strand, within GFF6155 at 60.393 kb on + strand, within GFF6155 at 60.393 kb on + strand, within GFF6155 at 60.393 kb on + strand, within GFF6155 at 60.393 kb on + strand, within GFF6155 at 60.394 kb on - strand, within GFF6155 at 60.394 kb on - strand, within GFF6155 at 60.394 kb on - strand, within GFF6155 at 60.394 kb on - strand, within GFF6155 at 60.394 kb on - strand, within GFF6155 at 60.394 kb on - strand, within GFF6155 at 60.394 kb on - strand, within GFF6155 at 60.394 kb on - strand, within GFF6155 at 60.522 kb on + strand, within GFF6155 at 60.522 kb on + strand, within GFF6155 at 60.522 kb on + strand, within GFF6155 at 60.523 kb on - strand, within GFF6155
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 58,269 + GFF6153 0.34 +1.2 58,269 + GFF6153 0.34 -1.0 58,269 + GFF6153 0.34 -0.4 58,269 + GFF6153 0.34 -1.5 58,269 + GFF6153 0.34 +0.5 58,270 - GFF6153 0.34 -0.2 58,270 - GFF6153 0.34 +0.1 58,509 + GFF6153 0.55 -0.7 58,509 + GFF6153 0.55 +1.5 58,509 + GFF6153 0.55 -0.4 58,510 - GFF6153 0.55 -0.3 58,510 - GFF6153 0.55 -0.2 58,510 - GFF6153 0.55 +0.2 58,510 - GFF6153 0.55 -0.5 58,648 - GFF6153 0.67 +0.5 58,648 - GFF6153 0.67 +0.3 59,134 + -0.0 59,135 - -0.3 59,139 + -1.3 59,140 - -0.4 59,140 - +0.1 59,781 + -0.3 59,781 + -1.5 59,808 + +0.1 59,808 + -0.1 59,808 + +0.2 59,809 - +0.3 59,809 - -0.5 60,057 + GFF6155 0.14 +0.0 60,058 - GFF6155 0.14 -0.5 60,058 - GFF6155 0.14 -0.4 60,058 - GFF6155 0.14 +0.9 60,138 + GFF6155 0.18 +1.1 60,231 + GFF6155 0.21 -0.5 60,231 + GFF6155 0.21 -0.5 60,231 + GFF6155 0.21 -0.8 60,231 + GFF6155 0.21 -1.7 60,231 + GFF6155 0.21 -0.4 60,231 + GFF6155 0.21 -0.7 60,232 - GFF6155 0.21 -0.8 60,232 - GFF6155 0.21 +2.2 60,232 - GFF6155 0.21 +0.7 60,363 + GFF6155 0.27 -0.2 60,364 - GFF6155 0.27 +0.0 60,364 - GFF6155 0.27 -0.2 60,384 + GFF6155 0.28 +0.1 60,384 + GFF6155 0.28 +1.3 60,385 - GFF6155 0.28 +0.9 60,393 + GFF6155 0.28 +1.6 60,393 + GFF6155 0.28 -2.2 60,393 + GFF6155 0.28 -0.3 60,393 + GFF6155 0.28 +2.1 60,393 + GFF6155 0.28 +0.3 60,393 + GFF6155 0.28 +0.2 60,393 + GFF6155 0.28 -0.1 60,394 - GFF6155 0.28 -1.6 60,394 - GFF6155 0.28 +0.0 60,394 - GFF6155 0.28 +3.1 60,394 - GFF6155 0.28 -0.1 60,394 - GFF6155 0.28 -0.3 60,394 - GFF6155 0.28 +0.0 60,394 - GFF6155 0.28 +0.0 60,394 - GFF6155 0.28 -1.0 60,522 + GFF6155 0.34 -0.0 60,522 + GFF6155 0.34 +1.3 60,522 + GFF6155 0.34 +0.7 60,523 - GFF6155 0.34 +0.5
Or see this region's nucleotide sequence