Strain Fitness in Variovorax sp. SCN45 around GFF5908

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
123,311	-		GFF5907	0.24	-1.1
123,311	-		GFF5907	0.24	-0.6
123,853	+		GFF5907	0.74	-0.4
123,853	+		GFF5907	0.74	-1.0
124,112	+				+0.4
124,114	+				-0.4
124,114	+				+0.1
124,115	-				-0.1
124,180	-				-0.3
124,195	-				-2.2
124,877	+		GFF5909	0.18	+0.0
124,944	-		GFF5909	0.25	-0.3
124,976	+		GFF5909	0.28	+0.1
124,976	+		GFF5909	0.28	+0.2
124,976	+		GFF5909	0.28	+0.9
124,977	-		GFF5909	0.28	+1.1
124,977	-		GFF5909	0.28	+0.1
124,977	-		GFF5909	0.28	-2.0
125,235	-		GFF5909	0.53	-0.8