Strain Fitness in Variovorax sp. SCN45 around GFF5887

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
106,983	-				+1.2
107,031	-				-0.8
107,031	-				-0.3
107,044	-				+0.3
107,044	-				-0.5
107,044	-				+0.1
107,044	-				+0.3
107,044	-				-0.7
107,044	-				+1.2
107,044	-				-0.1
107,044	-				+0.1
107,044	-				-0.2
107,044	-				+0.3
107,044	-				-1.3
107,044	-				-0.1
107,044	-				+0.6
107,044	-				-0.3
107,044	-				-1.3
107,044	-				-1.1
107,044	-				-1.0
107,044	-				-0.4
107,044	-				+0.3
107,044	-				-0.5
107,146	-				+0.9
107,146	-				+1.5
107,146	-				-1.3
107,146	-				-0.4
107,146	-				-0.3
107,146	-				+0.2
107,146	-				-1.0
107,146	-				-0.3
107,146	-				-0.8
107,146	-				-0.2
107,146	-				-0.0
107,146	-				-0.9
107,146	-				-1.5
107,146	-				-0.1
107,146	-				+1.0
107,146	-				+0.8
107,146	-				-0.4
107,146	-				-0.4
107,146	-				-0.6
107,146	-				-0.5
107,146	-				-0.6
107,146	-				-0.4
107,338	-		GFF5888	0.16	+0.7
107,404	-		GFF5888	0.22	-1.3