Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5801 and GFF5802 overlap by 4 nucleotides GFF5802 and GFF5803 are separated by 195 nucleotides
GFF5801 - Urea ABC transporter, permease protein UrtC, at 176,640 to 177,857
GFF5801
GFF5802 - Urea ABC transporter, ATPase protein UrtD, at 177,854 to 178,732
GFF5802
GFF5803 - Urea ABC transporter, ATPase protein UrtE, at 178,928 to 179,620
GFF5803
Position (kb) 177
178
179 Strain fitness (log2 ratio) -1
0
1
2 at 176.910 kb on + strand, within GFF5801 at 176.926 kb on - strand, within GFF5801 at 176.926 kb on - strand, within GFF5801 at 176.926 kb on - strand, within GFF5801 at 176.926 kb on - strand, within GFF5801 at 176.958 kb on + strand, within GFF5801 at 176.959 kb on - strand, within GFF5801 at 176.959 kb on - strand, within GFF5801 at 177.053 kb on - strand, within GFF5801 at 177.129 kb on + strand, within GFF5801 at 177.130 kb on - strand, within GFF5801 at 177.418 kb on - strand, within GFF5801 at 177.474 kb on + strand, within GFF5801 at 177.474 kb on + strand, within GFF5801 at 177.651 kb on + strand, within GFF5801 at 178.010 kb on + strand, within GFF5802 at 178.011 kb on - strand, within GFF5802 at 178.845 kb on + strand at 178.956 kb on - strand at 178.956 kb on - strand at 178.959 kb on - strand at 179.040 kb on + strand, within GFF5803 at 179.234 kb on + strand, within GFF5803 at 179.234 kb on + strand, within GFF5803 at 179.234 kb on + strand, within GFF5803 at 179.235 kb on - strand, within GFF5803 at 179.271 kb on - strand, within GFF5803 at 179.271 kb on - strand, within GFF5803 at 179.271 kb on - strand, within GFF5803 at 179.498 kb on + strand, within GFF5803 at 179.501 kb on + strand, within GFF5803 at 179.531 kb on + strand, within GFF5803 at 179.653 kb on + strand at 179.653 kb on + strand at 179.653 kb on + strand at 179.653 kb on + strand at 179.654 kb on - strand at 179.654 kb on - strand at 179.654 kb on - strand at 179.701 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 176,910 + GFF5801 0.22 +0.0 176,926 - GFF5801 0.23 +0.5 176,926 - GFF5801 0.23 +0.6 176,926 - GFF5801 0.23 +0.2 176,926 - GFF5801 0.23 -1.0 176,958 + GFF5801 0.26 -0.7 176,959 - GFF5801 0.26 -0.7 176,959 - GFF5801 0.26 +2.0 177,053 - GFF5801 0.34 +0.0 177,129 + GFF5801 0.40 -1.0 177,130 - GFF5801 0.40 -1.7 177,418 - GFF5801 0.64 -0.2 177,474 + GFF5801 0.68 -0.3 177,474 + GFF5801 0.68 +0.5 177,651 + GFF5801 0.83 +0.8 178,010 + GFF5802 0.18 -0.4 178,011 - GFF5802 0.18 -0.4 178,845 + +0.0 178,956 - -0.2 178,956 - -0.7 178,959 - -0.7 179,040 + GFF5803 0.16 -0.7 179,234 + GFF5803 0.44 +0.9 179,234 + GFF5803 0.44 -0.0 179,234 + GFF5803 0.44 -0.6 179,235 - GFF5803 0.44 +0.5 179,271 - GFF5803 0.49 -1.2 179,271 - GFF5803 0.49 -0.5 179,271 - GFF5803 0.49 -0.9 179,498 + GFF5803 0.82 -0.2 179,501 + GFF5803 0.83 +0.5 179,531 + GFF5803 0.87 -0.2 179,653 + -0.6 179,653 + +0.5 179,653 + -0.9 179,653 + +1.4 179,654 - -0.1 179,654 - -0.5 179,654 - -1.0 179,701 + +2.6
Or see this region's nucleotide sequence