Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5783 and GFF5784 are separated by 28 nucleotides GFF5784 and GFF5785 are separated by 177 nucleotides
GFF5783 - hypothetical protein, at 158,074 to 159,402
GFF5783
GFF5784 - hypothetical protein, at 159,431 to 159,832
GFF5784
GFF5785 - FIG00931285: hypothetical protein, at 160,010 to 161,425
GFF5785
Position (kb) 159
160 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 158.554 kb on + strand, within GFF5783 at 158.554 kb on + strand, within GFF5783 at 158.554 kb on + strand, within GFF5783 at 158.555 kb on - strand, within GFF5783 at 158.555 kb on - strand, within GFF5783 at 158.555 kb on - strand, within GFF5783 at 158.555 kb on - strand, within GFF5783 at 159.118 kb on + strand, within GFF5783 at 159.118 kb on + strand, within GFF5783 at 159.119 kb on - strand, within GFF5783 at 159.119 kb on - strand, within GFF5783 at 159.119 kb on - strand, within GFF5783 at 159.119 kb on - strand, within GFF5783 at 159.119 kb on - strand, within GFF5783 at 159.119 kb on - strand, within GFF5783 at 159.119 kb on - strand, within GFF5783 at 159.400 kb on + strand at 159.401 kb on - strand at 159.401 kb on - strand at 159.907 kb on + strand at 159.907 kb on + strand at 159.907 kb on + strand at 159.937 kb on + strand at 160.009 kb on + strand at 160.010 kb on - strand at 160.124 kb on + strand at 160.124 kb on + strand at 160.125 kb on - strand at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.175 kb on + strand, within GFF5785 at 160.176 kb on - strand, within GFF5785 at 160.176 kb on - strand, within GFF5785 at 160.176 kb on - strand, within GFF5785 at 160.176 kb on - strand, within GFF5785 at 160.176 kb on - strand, within GFF5785 at 160.176 kb on - strand, within GFF5785 at 160.176 kb on - strand, within GFF5785 at 160.176 kb on - strand, within GFF5785 at 160.256 kb on + strand, within GFF5785 at 160.256 kb on + strand, within GFF5785 at 160.256 kb on + strand, within GFF5785 at 160.257 kb on - strand, within GFF5785 at 160.268 kb on + strand, within GFF5785 at 160.313 kb on + strand, within GFF5785 at 160.478 kb on + strand, within GFF5785 at 160.478 kb on + strand, within GFF5785 at 160.478 kb on + strand, within GFF5785 at 160.478 kb on + strand, within GFF5785 at 160.479 kb on - strand, within GFF5785 at 160.562 kb on + strand, within GFF5785 at 160.563 kb on - strand, within GFF5785 at 160.568 kb on + strand, within GFF5785 at 160.568 kb on + strand, within GFF5785 at 160.568 kb on + strand, within GFF5785 at 160.568 kb on + strand, within GFF5785 at 160.568 kb on + strand, within GFF5785 at 160.569 kb on - strand, within GFF5785 at 160.628 kb on - strand, within GFF5785 at 160.628 kb on - strand, within GFF5785 at 160.631 kb on + strand, within GFF5785 at 160.631 kb on + strand, within GFF5785 at 160.632 kb on - strand, within GFF5785 at 160.632 kb on - strand, within GFF5785 at 160.632 kb on - strand, within GFF5785 at 160.796 kb on + strand, within GFF5785
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 158,554 + GFF5783 0.36 -0.2 158,554 + GFF5783 0.36 +0.5 158,554 + GFF5783 0.36 +0.0 158,555 - GFF5783 0.36 -1.0 158,555 - GFF5783 0.36 -0.2 158,555 - GFF5783 0.36 -0.1 158,555 - GFF5783 0.36 +0.2 159,118 + GFF5783 0.79 -0.5 159,118 + GFF5783 0.79 +0.4 159,119 - GFF5783 0.79 -1.6 159,119 - GFF5783 0.79 +0.7 159,119 - GFF5783 0.79 +0.5 159,119 - GFF5783 0.79 +0.6 159,119 - GFF5783 0.79 +0.3 159,119 - GFF5783 0.79 -1.8 159,119 - GFF5783 0.79 +0.5 159,400 + +0.0 159,401 - -0.1 159,401 - +1.3 159,907 + +0.0 159,907 + +1.6 159,907 + -0.6 159,937 + -0.5 160,009 + -0.5 160,010 - +0.4 160,124 + +1.2 160,124 + -0.2 160,125 - -0.4 160,175 + GFF5785 0.12 +0.0 160,175 + GFF5785 0.12 -1.6 160,175 + GFF5785 0.12 -0.5 160,175 + GFF5785 0.12 +1.3 160,175 + GFF5785 0.12 -0.2 160,175 + GFF5785 0.12 -0.4 160,175 + GFF5785 0.12 -1.2 160,175 + GFF5785 0.12 -0.7 160,175 + GFF5785 0.12 +1.0 160,175 + GFF5785 0.12 +0.1 160,175 + GFF5785 0.12 -0.4 160,176 - GFF5785 0.12 +0.8 160,176 - GFF5785 0.12 +0.2 160,176 - GFF5785 0.12 -0.2 160,176 - GFF5785 0.12 +0.7 160,176 - GFF5785 0.12 -0.2 160,176 - GFF5785 0.12 -2.2 160,176 - GFF5785 0.12 -0.1 160,176 - GFF5785 0.12 -2.8 160,256 + GFF5785 0.17 +1.3 160,256 + GFF5785 0.17 -1.0 160,256 + GFF5785 0.17 -1.4 160,257 - GFF5785 0.17 -0.6 160,268 + GFF5785 0.18 +2.2 160,313 + GFF5785 0.21 -0.5 160,478 + GFF5785 0.33 +0.1 160,478 + GFF5785 0.33 +0.4 160,478 + GFF5785 0.33 -0.1 160,478 + GFF5785 0.33 +0.4 160,479 - GFF5785 0.33 +0.8 160,562 + GFF5785 0.39 +0.4 160,563 - GFF5785 0.39 +0.1 160,568 + GFF5785 0.39 -0.4 160,568 + GFF5785 0.39 -1.6 160,568 + GFF5785 0.39 -0.1 160,568 + GFF5785 0.39 +1.6 160,568 + GFF5785 0.39 -0.2 160,569 - GFF5785 0.39 +0.4 160,628 - GFF5785 0.44 -0.4 160,628 - GFF5785 0.44 -1.1 160,631 + GFF5785 0.44 +0.9 160,631 + GFF5785 0.44 +0.4 160,632 - GFF5785 0.44 -0.2 160,632 - GFF5785 0.44 -0.9 160,632 - GFF5785 0.44 -0.4 160,796 + GFF5785 0.56 +2.4
Or see this region's nucleotide sequence