Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5764 and GFF5765 are separated by 100 nucleotides GFF5765 and GFF5766 overlap by 4 nucleotides GFF5766 and GFF5767 overlap by 4 nucleotides
GFF5764 - hypothetical protein, at 136,701 to 138,008
GFF5764
GFF5765 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 138,109 to 138,942
GFF5765
GFF5766 - Chemotaxis protein CheD, at 138,939 to 139,613
GFF5766
GFF5767 - Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61), at 139,610 to 140,695
GFF5767
Position (kb) 138
139 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 137.231 kb on - strand, within GFF5764 at 137.490 kb on + strand, within GFF5764 at 137.491 kb on - strand, within GFF5764 at 137.505 kb on + strand, within GFF5764 at 137.506 kb on - strand, within GFF5764 at 137.589 kb on + strand, within GFF5764 at 138.070 kb on + strand at 138.070 kb on + strand at 138.070 kb on + strand at 138.070 kb on + strand at 138.070 kb on + strand at 138.074 kb on + strand at 138.074 kb on + strand at 138.074 kb on + strand at 138.074 kb on + strand at 138.074 kb on + strand at 138.075 kb on - strand at 138.075 kb on - strand at 138.214 kb on + strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.268 kb on + strand, within GFF5765 at 138.268 kb on + strand, within GFF5765 at 138.268 kb on + strand, within GFF5765 at 138.269 kb on - strand, within GFF5765 at 138.269 kb on - strand, within GFF5765 at 138.454 kb on + strand, within GFF5765 at 138.766 kb on + strand, within GFF5765 at 138.767 kb on - strand, within GFF5765 at 138.904 kb on + strand at 138.904 kb on + strand at 138.987 kb on + strand at 138.987 kb on + strand at 139.038 kb on + strand, within GFF5766 at 139.038 kb on + strand, within GFF5766 at 139.038 kb on + strand, within GFF5766 at 139.038 kb on + strand, within GFF5766 at 139.041 kb on + strand, within GFF5766 at 139.041 kb on + strand, within GFF5766 at 139.041 kb on + strand, within GFF5766 at 139.042 kb on - strand, within GFF5766 at 139.042 kb on - strand, within GFF5766 at 139.206 kb on + strand, within GFF5766 at 139.353 kb on + strand, within GFF5766 at 139.354 kb on - strand, within GFF5766 at 139.419 kb on + strand, within GFF5766 at 139.419 kb on + strand, within GFF5766 at 139.419 kb on + strand, within GFF5766 at 139.419 kb on + strand, within GFF5766 at 139.419 kb on + strand, within GFF5766 at 139.419 kb on + strand, within GFF5766 at 139.420 kb on - strand, within GFF5766 at 139.420 kb on - strand, within GFF5766 at 139.632 kb on + strand at 139.632 kb on + strand at 139.632 kb on + strand at 139.632 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 137,231 - GFF5764 0.41 +0.1 137,490 + GFF5764 0.60 -0.4 137,491 - GFF5764 0.60 -2.2 137,505 + GFF5764 0.61 -0.3 137,506 - GFF5764 0.62 +0.3 137,589 + GFF5764 0.68 +0.4 138,070 + +0.6 138,070 + +0.9 138,070 + -0.2 138,070 + -0.2 138,070 + +0.0 138,074 + -0.5 138,074 + -0.4 138,074 + -1.4 138,074 + -0.6 138,074 + -0.1 138,075 - -0.7 138,075 - +0.8 138,214 + GFF5765 0.13 +1.6 138,215 - GFF5765 0.13 +0.5 138,215 - GFF5765 0.13 +0.2 138,215 - GFF5765 0.13 +0.4 138,215 - GFF5765 0.13 -0.6 138,215 - GFF5765 0.13 +1.3 138,215 - GFF5765 0.13 -0.0 138,268 + GFF5765 0.19 -0.6 138,268 + GFF5765 0.19 -0.3 138,268 + GFF5765 0.19 -0.8 138,269 - GFF5765 0.19 -0.2 138,269 - GFF5765 0.19 -0.6 138,454 + GFF5765 0.41 +1.0 138,766 + GFF5765 0.79 -0.2 138,767 - GFF5765 0.79 -0.7 138,904 + -0.5 138,904 + -3.0 138,987 + -0.4 138,987 + +0.4 139,038 + GFF5766 0.15 -0.8 139,038 + GFF5766 0.15 +1.6 139,038 + GFF5766 0.15 -0.4 139,038 + GFF5766 0.15 -0.3 139,041 + GFF5766 0.15 -0.2 139,041 + GFF5766 0.15 -0.4 139,041 + GFF5766 0.15 -1.2 139,042 - GFF5766 0.15 -0.5 139,042 - GFF5766 0.15 -1.1 139,206 + GFF5766 0.40 +0.5 139,353 + GFF5766 0.61 -0.3 139,354 - GFF5766 0.61 +0.9 139,419 + GFF5766 0.71 +0.4 139,419 + GFF5766 0.71 +0.4 139,419 + GFF5766 0.71 -0.4 139,419 + GFF5766 0.71 +1.3 139,419 + GFF5766 0.71 -0.8 139,419 + GFF5766 0.71 -0.7 139,420 - GFF5766 0.71 -0.4 139,420 - GFF5766 0.71 +0.4 139,632 + +0.1 139,632 + +0.0 139,632 + -0.2 139,632 + +1.0
Or see this region's nucleotide sequence