Strain Fitness in Variovorax sp. SCN45 around GFF5741

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
113,798	+		GFF5739	0.16	+1.0
113,799	-		GFF5739	0.16	+0.1
114,038	-				+1.6
114,041	+				-0.4
114,041	+				-0.6
114,041	+				-0.7
114,042	-				-0.5
114,043	+				-0.1
114,043	+				+0.5
114,043	+				-0.7
114,043	+				+0.0
114,043	+				+0.4
114,043	+				-1.2
114,044	-				+1.2
114,044	-				+0.1
114,044	-				-1.7
114,044	-				+1.3
114,044	-				+1.2
114,437	-		GFF5740	0.53	+0.3
114,448	+		GFF5740	0.54	-2.1
115,355	+		GFF5742	0.14	-0.8
115,356	-		GFF5742	0.14	+1.1
115,356	-		GFF5742	0.14	+0.0
115,397	+		GFF5742	0.23	-1.2
115,819	-				+0.1
116,215	-		GFF5743	0.46	+0.0
116,215	-		GFF5743	0.46	-0.1