Strain Fitness in Variovorax sp. SCN45 around GFF5559

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

No fitness data for strains within 184,182 to 186,577
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500 ntGFF5556 and GFF5557 are separated by 11 nucleotidesGFF5557 and GFF5558 are separated by 8 nucleotidesGFF5558 and GFF5559 are separated by 20 nucleotidesGFF5559 and GFF5560 are separated by 24 nucleotidesGFF5560 and GFF5561 are separated by 11 nucleotidesGFF5561 and GFF5562 are separated by 18 nucleotides GFF5556 - LSU ribosomal protein L24p (L26e), at 183,964 to 184,296 GFF5556 GFF5557 - LSU ribosomal protein L5p (L11e), at 184,308 to 184,847 GFF5557 GFF5558 - SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent, at 184,856 to 185,161 GFF5558 GFF5559 - SSU ribosomal protein S8p (S15Ae), at 185,182 to 185,577 GFF5559 GFF5560 - LSU ribosomal protein L6p (L9e), at 185,602 to 186,135 GFF5560 GFF5561 - LSU ribosomal protein L18p (L5e), at 186,147 to 186,515 GFF5561 GFF5562 - SSU ribosomal protein S5p (S2e), at 186,534 to 187,052 GFF5562