Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5485 and GFF5486 are separated by 18 nucleotides GFF5486 and GFF5487 are separated by 127 nucleotides
GFF5485 - Protein translocase subunit SecD, at 115,363 to 117,243
GFF5485
GFF5486 - Protein translocase subunit SecF, at 117,262 to 118,221
GFF5486
GFF5487 - Thymidine phosphorylase (EC 2.4.2.4), at 118,349 to 120,748
GFF5487
Position (kb) 117
118
119 Strain fitness (log2 ratio) -2
-1
0
1
2 at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.241 kb on + strand at 117.249 kb on + strand at 117.249 kb on + strand at 117.249 kb on + strand at 117.249 kb on + strand at 118.226 kb on + strand at 118.226 kb on + strand at 118.227 kb on - strand at 118.227 kb on - strand at 118.227 kb on - strand at 118.227 kb on - strand at 118.227 kb on - strand at 118.322 kb on + strand at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.916 kb on + strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487 at 118.917 kb on - strand, within GFF5487
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 117,241 + -0.2 117,241 + -1.0 117,241 + -0.3 117,241 + -0.5 117,241 + -0.3 117,241 + -1.0 117,241 + +0.8 117,241 + -2.1 117,241 + -0.4 117,241 + -1.0 117,241 + -0.0 117,241 + -0.3 117,241 + +0.6 117,241 + +1.8 117,249 + +0.3 117,249 + +0.6 117,249 + +0.7 117,249 + -0.8 118,226 + -1.0 118,226 + -0.7 118,227 - +0.5 118,227 - -0.7 118,227 - +1.4 118,227 - -0.2 118,227 - +0.0 118,322 + +0.5 118,916 + GFF5487 0.24 -1.5 118,916 + GFF5487 0.24 -0.6 118,916 + GFF5487 0.24 -0.9 118,916 + GFF5487 0.24 -0.9 118,916 + GFF5487 0.24 -0.4 118,916 + GFF5487 0.24 +0.1 118,916 + GFF5487 0.24 -0.1 118,916 + GFF5487 0.24 -2.5 118,916 + GFF5487 0.24 -1.3 118,916 + GFF5487 0.24 +0.6 118,916 + GFF5487 0.24 -0.5 118,916 + GFF5487 0.24 -0.7 118,916 + GFF5487 0.24 +0.3 118,917 - GFF5487 0.24 +0.6 118,917 - GFF5487 0.24 +1.1 118,917 - GFF5487 0.24 -0.2 118,917 - GFF5487 0.24 +1.1 118,917 - GFF5487 0.24 -2.4 118,917 - GFF5487 0.24 -0.4 118,917 - GFF5487 0.24 +0.1 118,917 - GFF5487 0.24 -0.3 118,917 - GFF5487 0.24 -0.7 118,917 - GFF5487 0.24 -0.9 118,917 - GFF5487 0.24 -0.4 118,917 - GFF5487 0.24 -1.6 118,917 - GFF5487 0.24 -0.1 118,917 - GFF5487 0.24 -0.3 118,917 - GFF5487 0.24 -0.0 118,917 - GFF5487 0.24 +0.4 118,917 - GFF5487 0.24 -0.3 118,917 - GFF5487 0.24 -0.1 118,917 - GFF5487 0.24 -0.9
Or see this region's nucleotide sequence