Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5361 and GFF5362 are separated by 65 nucleotides GFF5362 and GFF5363 are separated by 13 nucleotides GFF5363 and GFF5364 are separated by 66 nucleotides GFF5364 and GFF5365 are separated by 135 nucleotides
GFF5361 - FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 235,533 to 235,892
GFF5361
GFF5362 - Twin-arginine translocation protein TatA, at 235,958 to 236,203
GFF5362
GFF5363 - Twin-arginine translocation protein TatB, at 236,217 to 236,687
GFF5363
GFF5364 - Twin-arginine translocation protein TatC, at 236,754 to 237,566
GFF5364
GFF5365 - Outer membrane stress sensor protease DegS, at 237,702 to 238,862
GFF5365
Position (kb) 236
237
238 Strain fitness (log2 ratio) -2
-1
0
1 at 235.900 kb on + strand at 235.918 kb on + strand at 235.918 kb on + strand at 235.918 kb on + strand at 235.918 kb on + strand at 236.541 kb on + strand, within GFF5363 at 236.595 kb on + strand, within GFF5363 at 236.685 kb on + strand at 236.685 kb on + strand at 236.685 kb on + strand at 236.685 kb on + strand at 236.685 kb on + strand at 236.686 kb on - strand at 236.686 kb on - strand at 236.686 kb on - strand at 236.686 kb on - strand at 236.686 kb on - strand at 237.625 kb on + strand at 237.703 kb on + strand at 237.703 kb on + strand at 237.703 kb on + strand at 237.703 kb on + strand at 237.703 kb on + strand at 237.703 kb on + strand at 237.703 kb on + strand at 237.703 kb on + strand at 238.129 kb on + strand, within GFF5365 at 238.129 kb on + strand, within GFF5365 at 238.130 kb on - strand, within GFF5365 at 238.130 kb on - strand, within GFF5365 at 238.130 kb on - strand, within GFF5365 at 238.516 kb on + strand, within GFF5365 at 238.516 kb on + strand, within GFF5365 at 238.517 kb on - strand, within GFF5365 at 238.517 kb on - strand, within GFF5365 at 238.517 kb on - strand, within GFF5365 at 238.517 kb on - strand, within GFF5365 at 238.517 kb on - strand, within GFF5365 at 238.517 kb on - strand, within GFF5365 at 238.517 kb on - strand, within GFF5365
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 235,900 + -0.4 235,918 + +1.3 235,918 + -0.6 235,918 + +0.0 235,918 + +0.1 236,541 + GFF5363 0.69 +0.1 236,595 + GFF5363 0.80 -1.2 236,685 + -1.5 236,685 + -0.7 236,685 + -1.0 236,685 + -0.4 236,685 + +0.6 236,686 - -0.6 236,686 - +0.8 236,686 - +0.5 236,686 - +0.5 236,686 - +0.6 237,625 + +0.1 237,703 + +0.6 237,703 + -0.4 237,703 + -0.6 237,703 + -0.2 237,703 + -0.3 237,703 + -0.3 237,703 + +0.0 237,703 + -0.8 238,129 + GFF5365 0.37 +0.5 238,129 + GFF5365 0.37 +0.9 238,130 - GFF5365 0.37 +1.3 238,130 - GFF5365 0.37 +1.2 238,130 - GFF5365 0.37 +0.0 238,516 + GFF5365 0.70 -0.3 238,516 + GFF5365 0.70 -2.1 238,517 - GFF5365 0.70 +0.1 238,517 - GFF5365 0.70 -0.6 238,517 - GFF5365 0.70 +0.0 238,517 - GFF5365 0.70 -0.7 238,517 - GFF5365 0.70 -0.2 238,517 - GFF5365 0.70 +0.1 238,517 - GFF5365 0.70 -0.7
Or see this region's nucleotide sequence