Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5182 and GFF5183 are separated by 0 nucleotides GFF5183 and GFF5184 are separated by 433 nucleotides
GFF5182 - no description, at 35,416 to 36,468
GFF5182
GFF5183 - no description, at 36,469 to 36,603
GFF5183
GFF5184 - no description, at 37,037 to 37,342
GFF5184
Position (kb) 36
37 Strain fitness (log2 ratio) -2
-1
0
1
2 at 35.482 kb on + strand at 35.482 kb on + strand at 35.482 kb on + strand at 35.483 kb on - strand at 35.483 kb on - strand at 35.483 kb on - strand at 35.483 kb on - strand at 35.483 kb on - strand at 35.483 kb on - strand at 35.483 kb on - strand at 35.483 kb on - strand at 35.531 kb on + strand, within GFF5182 at 35.579 kb on + strand, within GFF5182 at 35.580 kb on - strand, within GFF5182 at 35.580 kb on - strand, within GFF5182 at 35.580 kb on - strand, within GFF5182 at 35.580 kb on - strand, within GFF5182 at 35.580 kb on - strand, within GFF5182 at 35.580 kb on - strand, within GFF5182 at 35.580 kb on - strand, within GFF5182 at 35.633 kb on + strand, within GFF5182 at 35.634 kb on - strand, within GFF5182 at 35.634 kb on - strand, within GFF5182 at 35.634 kb on - strand, within GFF5182 at 35.735 kb on + strand, within GFF5182 at 35.735 kb on + strand, within GFF5182 at 35.735 kb on + strand, within GFF5182 at 35.736 kb on - strand, within GFF5182 at 35.736 kb on - strand, within GFF5182 at 35.736 kb on - strand, within GFF5182 at 35.758 kb on - strand, within GFF5182 at 35.922 kb on + strand, within GFF5182 at 35.922 kb on + strand, within GFF5182 at 35.922 kb on + strand, within GFF5182 at 35.923 kb on - strand, within GFF5182 at 35.925 kb on + strand, within GFF5182 at 35.926 kb on - strand, within GFF5182 at 35.926 kb on - strand, within GFF5182 at 35.968 kb on - strand, within GFF5182 at 36.086 kb on + strand, within GFF5182 at 36.086 kb on + strand, within GFF5182 at 36.087 kb on - strand, within GFF5182 at 36.121 kb on - strand, within GFF5182 at 36.121 kb on - strand, within GFF5182 at 36.126 kb on + strand, within GFF5182 at 36.126 kb on + strand, within GFF5182 at 36.126 kb on + strand, within GFF5182 at 36.127 kb on - strand, within GFF5182 at 36.127 kb on - strand, within GFF5182 at 36.127 kb on - strand, within GFF5182 at 36.127 kb on - strand, within GFF5182 at 36.127 kb on - strand, within GFF5182 at 36.127 kb on - strand, within GFF5182 at 36.127 kb on - strand, within GFF5182 at 36.128 kb on + strand, within GFF5182 at 36.128 kb on + strand, within GFF5182 at 36.128 kb on + strand, within GFF5182 at 36.128 kb on + strand, within GFF5182 at 36.128 kb on + strand, within GFF5182 at 36.128 kb on + strand, within GFF5182 at 36.128 kb on + strand, within GFF5182 at 36.128 kb on + strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.129 kb on - strand, within GFF5182 at 36.171 kb on + strand, within GFF5182 at 36.270 kb on - strand, within GFF5182 at 36.270 kb on - strand, within GFF5182 at 36.287 kb on + strand, within GFF5182 at 36.287 kb on + strand, within GFF5182 at 36.287 kb on + strand, within GFF5182 at 36.288 kb on - strand, within GFF5182 at 36.288 kb on - strand, within GFF5182 at 36.359 kb on + strand, within GFF5182 at 36.417 kb on + strand at 36.417 kb on + strand at 36.417 kb on + strand at 36.418 kb on - strand at 36.418 kb on - strand at 36.418 kb on - strand at 36.418 kb on - strand at 36.418 kb on - strand at 36.423 kb on + strand at 36.424 kb on - strand at 36.470 kb on + strand at 36.470 kb on + strand at 36.474 kb on + strand at 36.589 kb on + strand, within GFF5183 at 36.589 kb on + strand, within GFF5183 at 36.656 kb on + strand at 36.735 kb on + strand at 36.735 kb on + strand at 36.735 kb on + strand at 36.735 kb on + strand at 36.735 kb on + strand at 36.735 kb on + strand at 36.735 kb on + strand at 36.736 kb on - strand at 36.736 kb on - strand at 36.736 kb on - strand at 36.736 kb on - strand at 36.736 kb on - strand at 36.736 kb on - strand at 36.741 kb on + strand at 36.741 kb on + strand at 36.741 kb on + strand at 36.742 kb on - strand at 36.742 kb on - strand at 36.767 kb on + strand at 36.767 kb on + strand at 36.767 kb on + strand at 36.767 kb on + strand at 36.768 kb on - strand at 36.768 kb on - strand at 36.906 kb on + strand at 36.906 kb on + strand at 36.964 kb on + strand at 36.964 kb on + strand at 36.964 kb on + strand at 36.964 kb on + strand at 36.964 kb on + strand at 36.964 kb on + strand at 36.965 kb on - strand at 36.965 kb on - strand at 36.965 kb on - strand at 36.965 kb on - strand at 36.983 kb on + strand at 36.983 kb on + strand at 36.983 kb on + strand at 36.983 kb on + strand at 36.983 kb on + strand at 36.984 kb on - strand at 36.984 kb on - strand at 36.984 kb on - strand at 36.984 kb on - strand at 37.021 kb on - strand at 37.030 kb on + strand at 37.030 kb on + strand at 37.031 kb on - strand at 37.038 kb on + strand at 37.038 kb on + strand at 37.038 kb on + strand at 37.038 kb on + strand at 37.038 kb on + strand at 37.038 kb on + strand at 37.039 kb on - strand at 37.039 kb on - strand at 37.039 kb on - strand at 37.039 kb on - strand at 37.074 kb on + strand, within GFF5184 at 37.075 kb on - strand, within GFF5184 at 37.075 kb on - strand, within GFF5184 at 37.090 kb on + strand, within GFF5184 at 37.178 kb on - strand, within GFF5184 at 37.232 kb on + strand, within GFF5184 at 37.233 kb on - strand, within GFF5184 at 37.233 kb on - strand, within GFF5184 at 37.233 kb on - strand, within GFF5184 at 37.312 kb on - strand at 37.312 kb on - strand at 37.347 kb on + strand at 37.349 kb on + strand at 37.349 kb on + strand at 37.349 kb on + strand at 37.349 kb on + strand at 37.349 kb on + strand at 37.349 kb on + strand at 37.350 kb on - strand at 37.350 kb on - strand at 37.350 kb on - strand at 37.350 kb on - strand at 37.412 kb on - strand at 37.534 kb on - strand at 37.534 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 35,482 + -0.7 35,482 + -0.1 35,482 + -0.7 35,483 - -1.2 35,483 - -0.9 35,483 - +0.5 35,483 - -0.1 35,483 - -0.3 35,483 - +0.7 35,483 - +0.3 35,483 - -0.7 35,531 + GFF5182 0.11 +0.3 35,579 + GFF5182 0.15 -0.6 35,580 - GFF5182 0.16 +0.7 35,580 - GFF5182 0.16 -0.7 35,580 - GFF5182 0.16 -0.2 35,580 - GFF5182 0.16 +0.5 35,580 - GFF5182 0.16 +0.5 35,580 - GFF5182 0.16 -0.4 35,580 - GFF5182 0.16 -0.5 35,633 + GFF5182 0.21 -0.4 35,634 - GFF5182 0.21 +1.3 35,634 - GFF5182 0.21 -0.6 35,634 - GFF5182 0.21 +0.0 35,735 + GFF5182 0.30 -0.7 35,735 + GFF5182 0.30 -0.5 35,735 + GFF5182 0.30 +0.5 35,736 - GFF5182 0.30 +0.6 35,736 - GFF5182 0.30 +1.0 35,736 - GFF5182 0.30 +0.0 35,758 - GFF5182 0.32 -1.0 35,922 + GFF5182 0.48 -1.1 35,922 + GFF5182 0.48 +1.2 35,922 + GFF5182 0.48 +0.5 35,923 - GFF5182 0.48 +1.1 35,925 + GFF5182 0.48 +0.1 35,926 - GFF5182 0.48 +0.3 35,926 - GFF5182 0.48 -1.9 35,968 - GFF5182 0.52 -0.9 36,086 + GFF5182 0.64 -0.6 36,086 + GFF5182 0.64 -0.8 36,087 - GFF5182 0.64 +0.5 36,121 - GFF5182 0.67 +0.5 36,121 - GFF5182 0.67 -0.3 36,126 + GFF5182 0.67 -0.7 36,126 + GFF5182 0.67 -1.0 36,126 + GFF5182 0.67 +1.9 36,127 - GFF5182 0.68 -0.7 36,127 - GFF5182 0.68 -0.7 36,127 - GFF5182 0.68 +0.4 36,127 - GFF5182 0.68 +0.3 36,127 - GFF5182 0.68 +1.9 36,127 - GFF5182 0.68 -0.4 36,127 - GFF5182 0.68 -0.7 36,128 + GFF5182 0.68 -0.1 36,128 + GFF5182 0.68 -0.1 36,128 + GFF5182 0.68 -0.1 36,128 + GFF5182 0.68 -0.3 36,128 + GFF5182 0.68 +1.6 36,128 + GFF5182 0.68 -0.6 36,128 + GFF5182 0.68 -1.2 36,128 + GFF5182 0.68 -0.4 36,129 - GFF5182 0.68 -1.1 36,129 - GFF5182 0.68 -1.0 36,129 - GFF5182 0.68 -0.7 36,129 - GFF5182 0.68 -0.6 36,129 - GFF5182 0.68 -2.2 36,129 - GFF5182 0.68 -0.5 36,129 - GFF5182 0.68 -0.6 36,129 - GFF5182 0.68 -0.3 36,129 - GFF5182 0.68 -0.7 36,129 - GFF5182 0.68 +0.5 36,171 + GFF5182 0.72 +0.7 36,270 - GFF5182 0.81 -0.2 36,270 - GFF5182 0.81 +0.9 36,287 + GFF5182 0.83 +1.2 36,287 + GFF5182 0.83 -0.5 36,287 + GFF5182 0.83 -0.5 36,288 - GFF5182 0.83 -0.6 36,288 - GFF5182 0.83 -0.2 36,359 + GFF5182 0.90 +0.7 36,417 + -0.3 36,417 + +0.4 36,417 + -0.4 36,418 - -0.3 36,418 - +0.7 36,418 - +0.6 36,418 - -1.2 36,418 - -0.3 36,423 + -0.4 36,424 - +0.4 36,470 + -0.5 36,470 + +0.2 36,474 + -0.9 36,589 + GFF5183 0.89 -1.0 36,589 + GFF5183 0.89 -1.6 36,656 + -0.5 36,735 + -0.1 36,735 + -0.8 36,735 + +0.5 36,735 + -0.6 36,735 + -1.5 36,735 + +0.7 36,735 + -1.3 36,736 - +0.4 36,736 - -0.2 36,736 - +0.5 36,736 - +1.0 36,736 - -0.2 36,736 - +0.3 36,741 + +0.4 36,741 + -0.6 36,741 + +0.6 36,742 - +1.2 36,742 - -1.3 36,767 + -0.6 36,767 + -0.4 36,767 + -0.9 36,767 + +0.5 36,768 - -0.4 36,768 - -1.6 36,906 + -0.0 36,906 + -1.0 36,964 + -0.6 36,964 + -0.2 36,964 + -0.6 36,964 + -0.8 36,964 + -0.4 36,964 + +0.4 36,965 - +0.4 36,965 - -0.4 36,965 - +0.0 36,965 - -1.5 36,983 + -0.1 36,983 + +0.2 36,983 + +0.1 36,983 + +1.0 36,983 + -0.3 36,984 - -0.3 36,984 - -0.3 36,984 - +0.6 36,984 - +0.6 37,021 - +0.6 37,030 + -1.6 37,030 + -0.8 37,031 - +0.2 37,038 + +0.0 37,038 + +0.7 37,038 + -0.9 37,038 + -0.3 37,038 + -1.2 37,038 + -0.4 37,039 - -0.2 37,039 - +0.1 37,039 - -2.1 37,039 - +0.5 37,074 + GFF5184 0.12 +0.4 37,075 - GFF5184 0.12 -0.1 37,075 - GFF5184 0.12 +0.1 37,090 + GFF5184 0.17 -0.1 37,178 - GFF5184 0.46 +0.0 37,232 + GFF5184 0.64 -0.8 37,233 - GFF5184 0.64 +0.1 37,233 - GFF5184 0.64 -2.1 37,233 - GFF5184 0.64 -1.2 37,312 - +0.9 37,312 - -0.2 37,347 + -0.2 37,349 + -1.8 37,349 + -0.2 37,349 + -0.1 37,349 + -0.3 37,349 + -0.5 37,349 + +0.7 37,350 - -0.1 37,350 - -1.1 37,350 - -0.1 37,350 - -0.2 37,412 - +0.7 37,534 - -0.6 37,534 - +0.0
Or see this region's nucleotide sequence