Strain Fitness in Variovorax sp. SCN45 around GFF5091

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
193,649	-				+0.5
193,649	-				-0.1
193,649	-				-0.0
193,649	-				+0.0
193,649	-				+2.3
193,649	-				+2.0
193,650	-				-1.6
193,653	+				+1.0
193,653	+				-0.6
193,653	+				+1.0
193,653	+				+1.4
193,682	+				-0.3
193,682	+				-0.2
193,683	-				-1.7
194,081	-		GFF5090	0.78	-0.6
194,081	-		GFF5090	0.78	-2.0
194,129	-		GFF5090	0.89	+0.2
194,177	+				-0.1
194,177	+				-0.6
194,177	+				-0.4
194,177	+				-0.1
194,177	+				+0.4
194,177	+				+2.0
194,177	+				-0.2
194,177	+				-0.8
194,178	-				-0.2
194,178	-				-0.7
194,178	-				-2.0
194,178	-				-1.0
194,178	-				+1.2
194,208	+				-0.7
194,208	+				+0.8
194,208	+				+0.0
194,209	-				-0.7
194,209	-				+0.2
194,209	-				+0.5
194,274	+		GFF5091	0.16	-0.8
194,275	-		GFF5091	0.16	-1.0
194,822	+				+0.0
194,822	+				-0.9
194,822	+				-0.5
194,823	-				-0.4
194,823	-				+0.2
194,823	-				-1.5
195,116	+		GFF5092	0.40	-1.6
195,117	-		GFF5092	0.40	-1.9
195,117	-		GFF5092	0.40	+1.2
195,117	-		GFF5092	0.40	+0.3
195,179	+		GFF5092	0.48	-0.5
195,198	-		GFF5092	0.51	+1.8
195,215	+		GFF5092	0.53	-0.3
195,215	+		GFF5092	0.53	+1.8
195,215	+		GFF5092	0.53	-1.4
195,216	-		GFF5092	0.53	-0.4
195,277	+		GFF5092	0.61	-0.5
195,277	+		GFF5092	0.61	+0.3
195,425	+		GFF5092	0.80	-0.3
195,628	+				-0.7
195,629	-				-0.8
195,629	-				-0.3
195,629	-				-0.6