Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5057 and GFF5058 are separated by 54 nucleotides GFF5058 and GFF5059 overlap by 4 nucleotides
GFF5057 - Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4), at 158,507 to 160,480
GFF5057
GFF5058 - Rod shape-determining protein MreD, at 160,535 to 161,056
GFF5058
GFF5059 - Rod shape-determining protein MreC, at 161,053 to 162,012
GFF5059
Position (kb) 160
161
162 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 159.873 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.888 kb on + strand, within GFF5057 at 159.957 kb on + strand, within GFF5057 at 159.957 kb on + strand, within GFF5057 at 159.957 kb on + strand, within GFF5057 at 159.957 kb on + strand, within GFF5057 at 159.957 kb on + strand, within GFF5057 at 159.957 kb on + strand, within GFF5057 at 159.993 kb on + strand, within GFF5057 at 159.993 kb on + strand, within GFF5057 at 159.993 kb on + strand, within GFF5057 at 159.994 kb on - strand, within GFF5057 at 160.233 kb on + strand, within GFF5057 at 160.234 kb on - strand, within GFF5057 at 160.234 kb on - strand, within GFF5057 at 160.242 kb on + strand, within GFF5057 at 160.242 kb on + strand, within GFF5057 at 160.242 kb on + strand, within GFF5057 at 160.242 kb on + strand, within GFF5057 at 160.243 kb on - strand, within GFF5057 at 160.243 kb on - strand, within GFF5057 at 160.243 kb on - strand, within GFF5057 at 160.243 kb on - strand, within GFF5057 at 160.368 kb on + strand at 160.368 kb on + strand at 160.368 kb on + strand at 160.368 kb on + strand at 160.368 kb on + strand at 160.368 kb on + strand at 160.368 kb on + strand at 160.368 kb on + strand at 160.369 kb on - strand at 160.369 kb on - strand at 160.369 kb on - strand at 160.369 kb on - strand at 160.369 kb on - strand at 160.369 kb on - strand at 160.369 kb on - strand at 160.369 kb on - strand at 160.494 kb on + strand at 160.494 kb on + strand at 160.494 kb on + strand at 160.494 kb on + strand at 160.494 kb on + strand at 160.494 kb on + strand at 160.495 kb on - strand at 160.495 kb on - strand at 160.495 kb on - strand at 160.495 kb on - strand at 160.536 kb on + strand at 160.536 kb on + strand at 160.537 kb on - strand at 160.537 kb on - strand at 160.537 kb on - strand at 160.537 kb on - strand at 160.586 kb on + strand at 160.586 kb on + strand at 160.586 kb on + strand at 160.587 kb on - strand at 160.587 kb on - strand at 160.587 kb on - strand at 160.587 kb on - strand at 162.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 159,873 + GFF5057 0.69 -1.7 159,888 + GFF5057 0.70 -0.5 159,888 + GFF5057 0.70 +1.0 159,888 + GFF5057 0.70 -2.0 159,888 + GFF5057 0.70 -0.6 159,888 + GFF5057 0.70 -1.4 159,888 + GFF5057 0.70 -1.9 159,888 + GFF5057 0.70 -0.4 159,888 + GFF5057 0.70 -1.0 159,888 + GFF5057 0.70 -1.2 159,888 + GFF5057 0.70 -0.9 159,888 + GFF5057 0.70 -0.9 159,888 + GFF5057 0.70 -3.6 159,888 + GFF5057 0.70 -2.8 159,888 + GFF5057 0.70 -0.8 159,957 + GFF5057 0.73 -1.2 159,957 + GFF5057 0.73 -1.2 159,957 + GFF5057 0.73 -1.6 159,957 + GFF5057 0.73 -1.5 159,957 + GFF5057 0.73 -1.7 159,957 + GFF5057 0.73 +0.3 159,993 + GFF5057 0.75 -1.5 159,993 + GFF5057 0.75 -1.1 159,993 + GFF5057 0.75 -2.3 159,994 - GFF5057 0.75 -1.6 160,233 + GFF5057 0.87 -1.6 160,234 - GFF5057 0.87 -0.9 160,234 - GFF5057 0.87 -2.8 160,242 + GFF5057 0.88 -1.1 160,242 + GFF5057 0.88 -1.6 160,242 + GFF5057 0.88 -1.6 160,242 + GFF5057 0.88 -0.0 160,243 - GFF5057 0.88 -1.0 160,243 - GFF5057 0.88 +1.1 160,243 - GFF5057 0.88 -0.9 160,243 - GFF5057 0.88 +0.2 160,368 + -1.7 160,368 + -1.7 160,368 + -0.7 160,368 + -0.6 160,368 + -0.5 160,368 + -0.0 160,368 + -2.1 160,368 + -1.7 160,369 - -2.2 160,369 - -1.4 160,369 - -0.9 160,369 - -2.1 160,369 - -2.1 160,369 - -1.1 160,369 - -1.7 160,369 - -0.2 160,494 + +0.1 160,494 + +0.1 160,494 + +0.5 160,494 + +0.8 160,494 + -1.0 160,494 + -0.5 160,495 - +0.0 160,495 - +0.2 160,495 - -0.4 160,495 - -0.2 160,536 + -0.4 160,536 + +0.8 160,537 - -0.4 160,537 - -0.4 160,537 - -0.4 160,537 - -0.7 160,586 + -0.7 160,586 + -1.5 160,586 + -1.2 160,587 - -0.3 160,587 - +0.4 160,587 - -0.6 160,587 - +0.0 162,046 - -0.5
Or see this region's nucleotide sequence