Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4836 and GFF4837 are separated by 41 nucleotides GFF4837 and GFF4838 overlap by 1 nucleotides GFF4838 and GFF4839 are separated by 72 nucleotides
GFF4836 - Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20), at 205,224 to 206,300
GFF4836
GFF4837 - Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20), at 206,342 to 208,783
GFF4837
GFF4838 - Integration host factor alpha subunit, at 208,783 to 209,166
GFF4838
GFF4839 - Transcriptional regulator PA2737, MerR family, at 209,239 to 209,706
GFF4839
Position (kb) 206
207
208
209 Strain fitness (log2 ratio) -2
-1
0
1 at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.311 kb on + strand at 206.315 kb on + strand at 206.315 kb on + strand at 206.315 kb on + strand at 206.315 kb on + strand at 206.315 kb on + strand at 209.130 kb on + strand at 209.131 kb on - strand at 209.172 kb on + strand at 209.172 kb on + strand at 209.173 kb on - strand at 209.173 kb on - strand at 209.173 kb on - strand at 209.173 kb on - strand at 209.197 kb on + strand at 209.197 kb on + strand at 209.197 kb on + strand at 209.197 kb on + strand at 209.198 kb on - strand at 209.202 kb on + strand at 209.202 kb on + strand at 209.202 kb on + strand at 209.202 kb on + strand at 209.202 kb on + strand at 209.203 kb on - strand at 209.203 kb on - strand at 209.203 kb on - strand at 209.203 kb on - strand at 209.276 kb on - strand at 209.332 kb on + strand, within GFF4839 at 209.389 kb on + strand, within GFF4839 at 209.389 kb on + strand, within GFF4839 at 209.389 kb on + strand, within GFF4839 at 209.392 kb on + strand, within GFF4839 at 209.392 kb on + strand, within GFF4839 at 209.393 kb on - strand, within GFF4839 at 209.393 kb on - strand, within GFF4839 at 209.440 kb on + strand, within GFF4839 at 209.714 kb on + strand at 209.714 kb on + strand at 209.715 kb on - strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.720 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 206,311 + -1.4 206,311 + -0.4 206,311 + -0.4 206,311 + +0.8 206,311 + -0.0 206,311 + -0.4 206,311 + -1.2 206,311 + -0.3 206,311 + -0.5 206,311 + -0.7 206,311 + +0.8 206,311 + -0.1 206,311 + -0.9 206,311 + -0.2 206,311 + -0.6 206,311 + -0.6 206,311 + +1.6 206,311 + -0.3 206,311 + +0.1 206,311 + -0.8 206,311 + -0.6 206,311 + -0.5 206,311 + +1.1 206,311 + +0.5 206,311 + -1.0 206,311 + +0.2 206,311 + +1.3 206,311 + -0.7 206,311 + +0.1 206,311 + +0.5 206,315 + +0.1 206,315 + -0.0 206,315 + -2.4 206,315 + +0.3 206,315 + +0.1 209,130 + -0.9 209,131 - -0.6 209,172 + -0.2 209,172 + +0.2 209,173 - +0.5 209,173 - +0.7 209,173 - +0.3 209,173 - +0.5 209,197 + +0.7 209,197 + +1.6 209,197 + +0.5 209,197 + +0.3 209,198 - -1.5 209,202 + -0.3 209,202 + +0.0 209,202 + +0.0 209,202 + -1.0 209,202 + +0.2 209,203 - +1.0 209,203 - +0.0 209,203 - -1.3 209,203 - -0.4 209,276 - +1.3 209,332 + GFF4839 0.20 -0.6 209,389 + GFF4839 0.32 -1.7 209,389 + GFF4839 0.32 -1.2 209,389 + GFF4839 0.32 -0.0 209,392 + GFF4839 0.33 -0.2 209,392 + GFF4839 0.33 +0.4 209,393 - GFF4839 0.33 -1.0 209,393 - GFF4839 0.33 -1.5 209,440 + GFF4839 0.43 -0.7 209,714 + +1.1 209,714 + -1.1 209,715 - -0.3 209,718 + +0.2 209,718 + -0.3 209,718 + -1.2 209,718 + +0.3 209,718 + -1.3 209,718 + -0.2 209,718 + -0.7 209,718 + -0.2 209,719 - -0.7 209,719 - -1.3 209,719 - -0.6 209,719 - +0.7 209,719 - -0.3 209,719 - +1.2 209,719 - -0.9 209,719 - +0.1 209,719 - -1.5 209,719 - -1.1 209,719 - -0.2 209,719 - -1.9 209,720 + -1.0
Or see this region's nucleotide sequence