Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4830 and GFF4831 are separated by 115 nucleotides GFF4831 and GFF4832 are separated by 217 nucleotides GFF4832 and GFF4833 are separated by 176 nucleotides GFF4833 and GFF4834 are separated by 151 nucleotides
GFF4830 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 200,136 to 201,098
GFF4830
GFF4831 - Beta-glucoside bgl operon antiterminator, BglG family, at 201,214 to 201,525
GFF4831
GFF4832 - Threonyl-tRNA synthetase (EC 6.1.1.3), at 201,743 to 203,650
GFF4832
GFF4833 - Translation initiation factor 3, at 203,827 to 204,372
GFF4833
GFF4834 - LSU ribosomal protein L35p, at 204,524 to 204,727
GFF4834
Position (kb) 201
202
203
204 Strain fitness (log2 ratio) -2
-1
0
1
2 at 201.026 kb on + strand at 201.084 kb on + strand at 201.084 kb on + strand at 201.084 kb on + strand at 201.084 kb on + strand at 201.084 kb on + strand at 201.084 kb on + strand at 201.157 kb on + strand at 201.158 kb on - strand at 201.223 kb on + strand at 201.223 kb on + strand at 201.223 kb on + strand at 201.224 kb on - strand at 201.224 kb on - strand at 201.555 kb on + strand at 201.586 kb on + strand at 201.586 kb on + strand at 201.586 kb on + strand at 201.586 kb on + strand at 201.586 kb on + strand at 201.587 kb on - strand at 201.602 kb on - strand at 201.602 kb on - strand at 201.681 kb on + strand at 201.681 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.669 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 203.671 kb on + strand at 204.382 kb on + strand at 204.382 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 201,026 + -0.0 201,084 + -0.6 201,084 + +0.9 201,084 + -0.2 201,084 + +0.2 201,084 + +0.4 201,084 + +0.6 201,157 + -0.5 201,158 - -0.4 201,223 + +0.5 201,223 + -1.5 201,223 + +0.7 201,224 - -0.5 201,224 - -1.0 201,555 + -0.1 201,586 + -0.9 201,586 + -0.2 201,586 + +0.3 201,586 + +0.0 201,586 + -0.3 201,587 - +1.5 201,602 - -1.4 201,602 - +1.9 201,681 + -0.1 201,681 + +0.3 203,669 + +0.0 203,669 + +0.2 203,669 + -1.3 203,669 + -0.8 203,669 + +2.3 203,669 + -0.3 203,669 + -0.0 203,669 + -1.0 203,669 + +0.7 203,669 + +0.2 203,669 + -2.2 203,669 + +1.3 203,669 + -0.3 203,669 + +0.6 203,669 + +0.3 203,669 + +1.0 203,669 + -0.1 203,669 + -0.2 203,669 + -0.6 203,669 + -2.0 203,669 + -0.6 203,669 + -0.6 203,669 + -0.3 203,669 + -0.1 203,669 + +0.3 203,669 + -0.8 203,669 + -0.4 203,671 + +0.5 203,671 + -1.2 203,671 + -1.2 203,671 + -0.0 203,671 + -1.0 203,671 + +0.3 203,671 + -0.1 203,671 + -0.7 203,671 + -1.4 203,671 + +0.1 203,671 + -0.7 204,382 + -0.5 204,382 + -1.1
Or see this region's nucleotide sequence