Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4626 and GFF4627 are separated by 0 nucleotides GFF4627 and GFF4629 overlap by 1 nucleotides GFF4629 and GFF4628 overlap by 36 nucleotides GFF4628 and GFF4630 are separated by 146 nucleotides
GFF4626 - dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL, at 268,039 to 268,800
GFF4626
GFF4627 - Glycosyltransferase, at 268,801 to 269,784
GFF4627
GFF4629 - Glycosyl transferase, group 2 family, at 269,784 to 271,535
GFF4629
GFF4628 - hypothetical protein, at 271,500 to 271,850
GFF4628
GFF4630 - O-antigen export system permease protein RfbD, at 271,997 to 272,800
GFF4630
Position (kb) 269
270
271
272 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 269.815 kb on + strand at 269.815 kb on + strand at 269.816 kb on - strand at 269.854 kb on + strand at 269.855 kb on - strand at 269.855 kb on - strand at 269.898 kb on - strand at 269.898 kb on - strand at 269.898 kb on - strand at 269.898 kb on - strand at 269.898 kb on - strand at 269.899 kb on + strand at 269.899 kb on + strand at 269.899 kb on + strand at 269.900 kb on - strand at 269.900 kb on - strand at 269.900 kb on - strand at 269.918 kb on - strand at 271.641 kb on + strand, within GFF4628 at 271.761 kb on + strand, within GFF4628 at 271.761 kb on + strand, within GFF4628 at 271.761 kb on + strand, within GFF4628 at 271.762 kb on - strand, within GFF4628 at 271.762 kb on - strand, within GFF4628 at 271.766 kb on + strand, within GFF4628 at 271.796 kb on + strand, within GFF4628 at 271.796 kb on + strand, within GFF4628 at 271.796 kb on + strand, within GFF4628 at 271.796 kb on + strand, within GFF4628 at 271.796 kb on + strand, within GFF4628 at 271.796 kb on + strand, within GFF4628 at 271.796 kb on + strand, within GFF4628 at 271.796 kb on + strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.797 kb on - strand, within GFF4628 at 271.848 kb on + strand at 271.986 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 269,815 + +0.2 269,815 + -0.9 269,816 - -1.3 269,854 + -1.9 269,855 - +0.1 269,855 - -1.4 269,898 - -0.2 269,898 - -0.5 269,898 - -0.4 269,898 - -1.3 269,898 - -2.5 269,899 + -1.4 269,899 + -1.9 269,899 + -2.7 269,900 - -2.7 269,900 - -0.7 269,900 - -0.5 269,918 - -1.7 271,641 + GFF4628 0.40 -0.7 271,761 + GFF4628 0.74 +0.5 271,761 + GFF4628 0.74 -0.1 271,761 + GFF4628 0.74 +1.2 271,762 - GFF4628 0.75 -0.2 271,762 - GFF4628 0.75 -0.1 271,766 + GFF4628 0.76 -1.1 271,796 + GFF4628 0.84 +0.3 271,796 + GFF4628 0.84 +0.9 271,796 + GFF4628 0.84 -1.5 271,796 + GFF4628 0.84 -0.2 271,796 + GFF4628 0.84 +0.6 271,796 + GFF4628 0.84 -0.1 271,796 + GFF4628 0.84 +0.2 271,796 + GFF4628 0.84 -0.2 271,797 - GFF4628 0.85 -0.0 271,797 - GFF4628 0.85 -0.9 271,797 - GFF4628 0.85 -0.2 271,797 - GFF4628 0.85 -0.2 271,797 - GFF4628 0.85 -1.2 271,797 - GFF4628 0.85 -0.4 271,797 - GFF4628 0.85 -3.4 271,797 - GFF4628 0.85 +0.1 271,797 - GFF4628 0.85 -0.3 271,797 - GFF4628 0.85 +0.2 271,797 - GFF4628 0.85 +2.5 271,797 - GFF4628 0.85 -0.2 271,797 - GFF4628 0.85 -0.6 271,797 - GFF4628 0.85 +0.2 271,797 - GFF4628 0.85 -2.2 271,797 - GFF4628 0.85 -0.5 271,797 - GFF4628 0.85 -1.2 271,848 + -0.1 271,986 + +0.5
Or see this region's nucleotide sequence