Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4608 and GFF4609 are separated by 39 nucleotides GFF4609 and GFF4610 are separated by 47 nucleotides
GFF4608 - 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17), at 249,037 to 251,436
GFF4608
GFF4609 - FIG00581832: hypothetical protein, at 251,476 to 251,910
GFF4609
GFF4610 - Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8), at 251,958 to 253,754
GFF4610
Position (kb) 251
252 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 250.505 kb on + strand, within GFF4608 at 250.506 kb on - strand, within GFF4608 at 250.506 kb on - strand, within GFF4608 at 250.638 kb on - strand, within GFF4608 at 250.979 kb on + strand, within GFF4608 at 250.979 kb on + strand, within GFF4608 at 250.979 kb on + strand, within GFF4608 at 250.979 kb on + strand, within GFF4608 at 250.980 kb on - strand, within GFF4608 at 250.980 kb on - strand, within GFF4608 at 251.123 kb on + strand, within GFF4608 at 251.123 kb on + strand, within GFF4608 at 251.123 kb on + strand, within GFF4608 at 251.123 kb on + strand, within GFF4608 at 251.123 kb on + strand, within GFF4608 at 251.207 kb on + strand at 251.207 kb on + strand at 251.207 kb on + strand at 251.208 kb on - strand at 251.446 kb on + strand at 251.446 kb on + strand at 251.446 kb on + strand at 251.447 kb on - strand at 251.447 kb on - strand at 251.447 kb on - strand at 251.447 kb on - strand at 251.447 kb on - strand at 251.447 kb on - strand at 251.447 kb on - strand at 251.477 kb on + strand at 251.477 kb on + strand at 251.477 kb on + strand at 251.478 kb on - strand at 251.478 kb on - strand at 251.949 kb on + strand at 251.949 kb on + strand at 251.949 kb on + strand at 251.949 kb on + strand at 251.949 kb on + strand at 251.949 kb on + strand at 251.950 kb on - strand at 251.950 kb on - strand at 251.950 kb on - strand at 251.950 kb on - strand at 251.950 kb on - strand at 251.950 kb on - strand at 251.950 kb on - strand at 251.950 kb on - strand at 251.950 kb on - strand at 251.952 kb on + strand at 251.952 kb on + strand at 251.953 kb on - strand at 251.953 kb on - strand at 252.052 kb on + strand at 252.053 kb on - strand at 252.053 kb on - strand at 252.053 kb on - strand at 252.053 kb on - strand at 252.082 kb on + strand at 252.083 kb on - strand at 252.083 kb on - strand at 252.083 kb on - strand at 252.181 kb on + strand, within GFF4610 at 252.182 kb on - strand, within GFF4610 at 252.182 kb on - strand, within GFF4610 at 252.430 kb on + strand, within GFF4610 at 252.430 kb on + strand, within GFF4610 at 252.430 kb on + strand, within GFF4610 at 252.430 kb on + strand, within GFF4610 at 252.431 kb on - strand, within GFF4610 at 252.431 kb on - strand, within GFF4610 at 252.431 kb on - strand, within GFF4610 at 252.431 kb on - strand, within GFF4610 at 252.431 kb on - strand, within GFF4610 at 252.431 kb on - strand, within GFF4610 at 252.431 kb on - strand, within GFF4610 at 252.431 kb on - strand, within GFF4610 at 252.431 kb on - strand, within GFF4610 at 252.817 kb on + strand, within GFF4610
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 250,505 + GFF4608 0.61 +0.6 250,506 - GFF4608 0.61 +0.1 250,506 - GFF4608 0.61 -0.5 250,638 - GFF4608 0.67 -1.2 250,979 + GFF4608 0.81 +0.6 250,979 + GFF4608 0.81 -0.0 250,979 + GFF4608 0.81 -0.6 250,979 + GFF4608 0.81 -0.2 250,980 - GFF4608 0.81 -1.9 250,980 - GFF4608 0.81 +0.0 251,123 + GFF4608 0.87 -0.4 251,123 + GFF4608 0.87 -0.3 251,123 + GFF4608 0.87 +0.8 251,123 + GFF4608 0.87 -0.5 251,123 + GFF4608 0.87 -0.2 251,207 + -0.2 251,207 + -0.5 251,207 + -0.1 251,208 - -1.1 251,446 + -0.7 251,446 + -0.1 251,446 + +0.0 251,447 - -0.1 251,447 - -0.8 251,447 - +0.1 251,447 - -3.1 251,447 - -0.6 251,447 - -1.4 251,447 - -0.3 251,477 + +2.1 251,477 + +0.0 251,477 + -0.4 251,478 - +0.6 251,478 - +0.2 251,949 + -0.7 251,949 + -0.4 251,949 + -1.8 251,949 + +0.9 251,949 + +0.2 251,949 + -1.9 251,950 - -0.4 251,950 - +0.6 251,950 - -0.2 251,950 - -1.8 251,950 - +0.4 251,950 - -0.4 251,950 - +0.4 251,950 - +0.9 251,950 - +0.4 251,952 + -1.2 251,952 + -0.7 251,953 - +0.5 251,953 - -0.2 252,052 + -0.5 252,053 - -1.2 252,053 - -0.8 252,053 - +1.6 252,053 - -0.5 252,082 + -2.6 252,083 - -0.6 252,083 - -0.3 252,083 - -1.4 252,181 + GFF4610 0.12 -1.2 252,182 - GFF4610 0.12 +0.1 252,182 - GFF4610 0.12 -0.4 252,430 + GFF4610 0.26 -0.4 252,430 + GFF4610 0.26 -0.2 252,430 + GFF4610 0.26 -1.7 252,430 + GFF4610 0.26 -0.5 252,431 - GFF4610 0.26 -0.6 252,431 - GFF4610 0.26 -1.5 252,431 - GFF4610 0.26 +0.4 252,431 - GFF4610 0.26 -0.2 252,431 - GFF4610 0.26 -0.6 252,431 - GFF4610 0.26 +0.2 252,431 - GFF4610 0.26 -0.6 252,431 - GFF4610 0.26 +0.1 252,431 - GFF4610 0.26 +0.4 252,817 + GFF4610 0.48 +0.1
Or see this region's nucleotide sequence