Strain Fitness in Variovorax sp. SCN45 around GFF4468

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
107,845	+				-1.7
107,845	+				+0.3
107,846	-				-0.1
107,846	-				-0.2
107,868	+				-0.2
107,869	-				-0.4
107,869	-				-0.2
107,881	+				-0.5
107,881	+				-0.2
107,882	-				+0.8
107,882	-				+0.3
107,882	-				-0.1
107,882	-				+1.0
107,882	-				-0.6
107,882	-				-0.2
107,942	+				-0.2
107,943	-				+0.1
109,371	-				-1.4
109,371	-				-0.5
109,379	-				-1.3
109,379	-				-2.1
109,379	-				-0.4
109,385	-				-2.5
109,525	+				+0.0
109,525	+				-0.4
109,525	+				-1.0
109,525	+				-0.2
109,526	-				-0.7
109,526	-				-1.8
109,636	-		GFF4469	0.10	-0.6
109,636	-		GFF4469	0.10	-0.2
109,680	-		GFF4469	0.14	-0.6