Strain Fitness in Variovorax sp. SCN45 around GFF4467

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
105,903	-		GFF4465	0.20	-0.4
105,903	-		GFF4465	0.20	+0.3
105,903	-		GFF4465	0.20	-0.4
105,903	-		GFF4465	0.20	-0.7
106,175	-		GFF4465	0.49	+0.2
106,453	+		GFF4465	0.78	+0.3
106,453	+		GFF4465	0.78	+0.5
106,682	+				-1.3
106,682	+				+0.4
106,682	+				-0.3
106,769	+		GFF4466	0.50	+0.8
106,770	-		GFF4466	0.50	-0.1
106,793	+		GFF4466	0.63	+0.3
106,794	-		GFF4466	0.64	+0.0
106,794	-		GFF4466	0.64	-1.1
106,794	-		GFF4466	0.64	-0.4
106,887	-				+0.1
107,845	+				-1.7
107,845	+				+0.3
107,846	-				-0.1
107,846	-				-0.2
107,868	+				-0.2
107,869	-				-0.4
107,869	-				-0.2
107,881	+				-0.5
107,881	+				-0.2
107,882	-				+0.8
107,882	-				+0.3
107,882	-				-0.1
107,882	-				+1.0
107,882	-				-0.6
107,882	-				-0.2
107,942	+				-0.2
107,943	-				+0.1